G1295849


Basic Information

Item Value
gene id G1295849
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 44037390 ~ 44037673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1478637
cactacgccatcatggattaaaatcatgcagcgcacgcaaggtccccctgctcaagccagcgcatgtccaggcctgtctgaagtttgccaatgaccatctggatgatccagaggaggaattggagaaggtcatgtggtctgatgagacaaaaatagagctttttggtctaaactccactcgccatgtttggaggaagaaggatgagtacaaccccaagaacaccatcccaaccgtgaagcatggaggtggtaacatcattctttggggatgcttttctgcaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1478637 True 284 lncRNA 0.49 1 44037390 44037673

Neighbor

gene id symbol gene type direction distance location
nipsnap2 nips2 coding upstream 12807 44005413 ~ 44024583 (+)
mrps17 mrps17 coding upstream 37459 43998013 ~ 43999931 (+)
mntb LOC106602836 coding upstream 319044 43698455 ~ 43718346 (+)
LOC110490730 NA coding upstream 339572 43696212 ~ 43697965 (+)
LOC110490107 lis1b coding upstream 345376 43641381 ~ 43692014 (+)
cblb cblb coding downstream 135679 44173352 ~ 44326246 (+)
LOC110490121 LOC106602827 coding downstream 548612 44586285 ~ 44603799 (+)
LOC110490732 LOC106602993 coding downstream 609120 44646793 ~ 44648830 (+)
cldn2 cldn7 coding downstream 681627 44719300 ~ 44721744 (+)
LOC110490127 LOC106602822 coding downstream 698087 44735760 ~ 44848514 (+)
G1295843 NA non-coding upstream 9512 44027587 ~ 44027878 (+)
G1295789 NA non-coding upstream 75093 43961985 ~ 43962297 (+)
G1295788 NA non-coding upstream 76493 43960438 ~ 43960897 (+)
G1295787 NA non-coding upstream 77784 43959399 ~ 43959606 (+)
G1295775 NA non-coding upstream 87990 43949184 ~ 43949400 (+)
G1295872 NA non-coding downstream 33313 44070986 ~ 44123435 (+)
G1295887 cfap54 non-coding downstream 57129 44094802 ~ 44095443 (+)
G1296030 NA non-coding downstream 115022 44152695 ~ 44153020 (+)
G1296051 NA non-coding downstream 130415 44168088 ~ 44168835 (+)
G1296050 NA non-coding downstream 352809 44390482 ~ 44391077 (+)
G1295845 NA other upstream 7529 44029436 ~ 44029861 (+)
G1295730 NA other upstream 120911 43916178 ~ 43916479 (+)
G1295348 LOC106602853 other upstream 439926 43596924 ~ 43597464 (+)
G1294319 NA other upstream 1269453 42764853 ~ 42767937 (+)
G1293295 NA other upstream 2127779 41909034 ~ 41909611 (+)
G1296266 LOC106602826 other downstream 509506 44547179 ~ 44581048 (+)
G1296185 NA other downstream 612028 44649701 ~ 44652079 (+)
G1298452 NA other downstream 2216666 46254339 ~ 46260437 (+)
brd1a LOC106575995 other downstream 2276579 46293582 ~ 46316075 (+)

Expression


Co-expression Network