G1296051


Basic Information

Item Value
gene id G1296051
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 44168088 ~ 44168835 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1478864
ATCCATTCACTGCTTTGTCGCATCCCTCAACTTTTTAATTACGCTGAGAGACGACACATTGTTGCGCGTTGTGATTTCGGTGTCCTGTATATTCCATGCCAGACTGAGAGGGGGTCAATGATATGTCGGTTCAAATCCAGCGGCAGTTTAGCTGCTAATCCCATCTTTTTCGCCATTCATGTTTCTCACTTAACCATAGAAGTCCCGTAAAATGACTTTCAGCTCCATTTTGGTTGTATTCACAAACTCACAATGTATCCCTTGTTCGGCGCACCAGTCAGTGAAGCGGTTCAGATGTGGACAAGGAGTCATCCTCCAGTGAAGATGAGAGGACGATCGGGACAGACCGGACATCCTGGTACCTGGTCACATCCAGCTGTGACCTGTCAATCAAGGCAGGTGGGGCGGAGCTCCACCTGTTTTGAGGGAGG

Function

NR:

description
PREDICTED: MORC family CW-type zinc finger protein 3 isoform X3

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1478864 True 431 lncRNA 0.49 2 44168088 44168835

Neighbor

gene id symbol gene type direction distance location
nipsnap2 nips2 coding upstream 143505 44005413 ~ 44024583 (+)
mrps17 mrps17 coding upstream 168157 43998013 ~ 43999931 (+)
mntb LOC106602836 coding upstream 449742 43698455 ~ 43718346 (+)
LOC110490730 NA coding upstream 470270 43696212 ~ 43697965 (+)
LOC110490107 lis1b coding upstream 476074 43641381 ~ 43692014 (+)
cblb cblb coding downstream 4517 44173352 ~ 44326246 (+)
LOC110490121 LOC106602827 coding downstream 417450 44586285 ~ 44603799 (+)
LOC110490732 LOC106602993 coding downstream 477958 44646793 ~ 44648830 (+)
cldn2 cldn7 coding downstream 550465 44719300 ~ 44721744 (+)
LOC110490127 LOC106602822 coding downstream 566925 44735760 ~ 44848514 (+)
G1296030 NA non-coding upstream 15068 44152695 ~ 44153020 (+)
G1295872 NA non-coding upstream 44653 44070986 ~ 44123435 (+)
G1295887 cfap54 non-coding upstream 72645 44094802 ~ 44095443 (+)
G1295849 NA non-coding upstream 130415 44037390 ~ 44037673 (+)
G1295843 NA non-coding upstream 140210 44027587 ~ 44027878 (+)
G1296050 NA non-coding downstream 221647 44390482 ~ 44391077 (+)
G1296182 NA non-coding downstream 229036 44397871 ~ 44613813 (+)
G1296227 NA non-coding downstream 266432 44435267 ~ 44436862 (+)
G1296228 NA non-coding downstream 275234 44444069 ~ 44456091 (+)
G1296282 NA non-coding downstream 398610 44567445 ~ 44573979 (+)
G1295845 NA other upstream 138227 44029436 ~ 44029861 (+)
G1295730 NA other upstream 251609 43916178 ~ 43916479 (+)
G1295348 LOC106602853 other upstream 570624 43596924 ~ 43597464 (+)
G1294319 NA other upstream 1400151 42764853 ~ 42767937 (+)
G1293295 NA other upstream 2258477 41909034 ~ 41909611 (+)
G1296266 LOC106602826 other downstream 378344 44547179 ~ 44581048 (+)
G1296185 NA other downstream 480866 44649701 ~ 44652079 (+)
G1298452 NA other downstream 2085504 46254339 ~ 46260437 (+)
brd1a LOC106575995 other downstream 2145417 46293582 ~ 46316075 (+)

Expression


Co-expression Network