Gene
RNA
| Item | Value |
|---|---|
| gene id | G1296050 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 44390482 ~ 44391077 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1478861 | True | 282 | lncRNA | 0.50 | 2 | 44390482 | 44391077 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cblb | cblb | coding | upstream | 64236 | 44173352 ~ 44326246 (+) |
| nipsnap2 | nips2 | coding | upstream | 365899 | 44005413 ~ 44024583 (+) |
| mrps17 | mrps17 | coding | upstream | 390551 | 43998013 ~ 43999931 (+) |
| mntb | LOC106602836 | coding | upstream | 672136 | 43698455 ~ 43718346 (+) |
| LOC110490730 | NA | coding | upstream | 692664 | 43696212 ~ 43697965 (+) |
| LOC110490121 | LOC106602827 | coding | downstream | 195208 | 44586285 ~ 44603799 (+) |
| LOC110490732 | LOC106602993 | coding | downstream | 255716 | 44646793 ~ 44648830 (+) |
| cldn2 | cldn7 | coding | downstream | 328223 | 44719300 ~ 44721744 (+) |
| LOC110490127 | LOC106602822 | coding | downstream | 344683 | 44735760 ~ 44848514 (+) |
| LOC110490129 | LOC106602819 | coding | downstream | 546908 | 44937985 ~ 44993895 (+) |
| G1296051 | NA | non-coding | upstream | 221647 | 44168088 ~ 44168835 (+) |
| G1296030 | NA | non-coding | upstream | 237462 | 44152695 ~ 44153020 (+) |
| G1295872 | NA | non-coding | upstream | 267047 | 44070986 ~ 44123435 (+) |
| G1295887 | cfap54 | non-coding | upstream | 295039 | 44094802 ~ 44095443 (+) |
| G1295849 | NA | non-coding | upstream | 352809 | 44037390 ~ 44037673 (+) |
| G1296182 | NA | non-coding | downstream | 6794 | 44397871 ~ 44613813 (+) |
| G1296227 | NA | non-coding | downstream | 44190 | 44435267 ~ 44436862 (+) |
| G1296228 | NA | non-coding | downstream | 52992 | 44444069 ~ 44456091 (+) |
| G1296282 | NA | non-coding | downstream | 176368 | 44567445 ~ 44573979 (+) |
| G1296283 | NA | non-coding | downstream | 178404 | 44569481 ~ 44574895 (+) |
| G1295845 | NA | other | upstream | 360621 | 44029436 ~ 44029861 (+) |
| G1295730 | NA | other | upstream | 474003 | 43916178 ~ 43916479 (+) |
| G1295348 | LOC106602853 | other | upstream | 793018 | 43596924 ~ 43597464 (+) |
| G1294319 | NA | other | upstream | 1622545 | 42764853 ~ 42767937 (+) |
| G1296266 | LOC106602826 | other | downstream | 156102 | 44547179 ~ 44581048 (+) |
| G1296185 | NA | other | downstream | 258624 | 44649701 ~ 44652079 (+) |
| G1298452 | NA | other | downstream | 1863262 | 46254339 ~ 46260437 (+) |
| brd1a | LOC106575995 | other | downstream | 1923175 | 46293582 ~ 46316075 (+) |
| G1299894 | NA | other | downstream | 3178753 | 47569830 ~ 47570663 (+) |
