Gene
RNA
| Item | Value |
|---|---|
| gene id | G1296182 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 44397871 ~ 44613813 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| post-GPI attachment to proteins factor 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1479004 | True | 537 | lncRNA | 0.44 | 2 | 44397871 | 44613813 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cblb | cblb | coding | upstream | 71625 | 44173352 ~ 44326246 (+) |
| nipsnap2 | nips2 | coding | upstream | 373288 | 44005413 ~ 44024583 (+) |
| mrps17 | mrps17 | coding | upstream | 397940 | 43998013 ~ 43999931 (+) |
| mntb | LOC106602836 | coding | upstream | 679525 | 43698455 ~ 43718346 (+) |
| LOC110490730 | NA | coding | upstream | 700053 | 43696212 ~ 43697965 (+) |
| LOC110490732 | LOC106602993 | coding | downstream | 32980 | 44646793 ~ 44648830 (+) |
| cldn2 | cldn7 | coding | downstream | 105487 | 44719300 ~ 44721744 (+) |
| LOC110490127 | LOC106602822 | coding | downstream | 121947 | 44735760 ~ 44848514 (+) |
| LOC110490129 | LOC106602819 | coding | downstream | 324172 | 44937985 ~ 44993895 (+) |
| LOC110490132 | LOC106602816 | coding | downstream | 476332 | 45090145 ~ 45151980 (+) |
| G1296050 | NA | non-coding | upstream | 6794 | 44390482 ~ 44391077 (+) |
| G1296051 | NA | non-coding | upstream | 229036 | 44168088 ~ 44168835 (+) |
| G1296030 | NA | non-coding | upstream | 244851 | 44152695 ~ 44153020 (+) |
| G1295872 | NA | non-coding | upstream | 274436 | 44070986 ~ 44123435 (+) |
| G1295887 | cfap54 | non-coding | upstream | 302428 | 44094802 ~ 44095443 (+) |
| G1296303 | NA | non-coding | downstream | 9808 | 44623621 ~ 44624085 (+) |
| G1296304 | NA | non-coding | downstream | 10756 | 44624569 ~ 44624869 (+) |
| G1296307 | NA | non-coding | downstream | 16040 | 44629853 ~ 44630112 (+) |
| G1296186 | NA | non-coding | downstream | 38434 | 44652247 ~ 44654702 (+) |
| G1296189 | prrg3 | non-coding | downstream | 41102 | 44654915 ~ 44656628 (+) |
| G1295845 | NA | other | upstream | 368010 | 44029436 ~ 44029861 (+) |
| G1295730 | NA | other | upstream | 481392 | 43916178 ~ 43916479 (+) |
| G1295348 | LOC106602853 | other | upstream | 800407 | 43596924 ~ 43597464 (+) |
| G1294319 | NA | other | upstream | 1629934 | 42764853 ~ 42767937 (+) |
| G1296185 | NA | other | downstream | 35888 | 44649701 ~ 44652079 (+) |
| G1298452 | NA | other | downstream | 1640526 | 46254339 ~ 46260437 (+) |
| brd1a | LOC106575995 | other | downstream | 1700439 | 46293582 ~ 46316075 (+) |
| G1299894 | NA | other | downstream | 2956017 | 47569830 ~ 47570663 (+) |
| G1300598 | LOC106575986 | other | downstream | 3332555 | 47946368 ~ 47947892 (+) |
