G1296227


Basic Information

Item Value
gene id G1296227
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 44435267 ~ 44436862 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1479052
GGGCTTTAACTCAGTGTGAAACAGAGGAAACACTACCTCTACCATTAGACAGGATagtcagacaggacagacaggtctTTGCCTCAGTGTGAAACAGAGGAAACACTTCCTCTACCGTTGACAGGTAAGACCCAACCACAATATGACCCCAAACACATTATTAATCAAGCAGTAAAACTAATTTGTGAAAGAAAATGCATTAGTCATACATAGCATTGCACATtctggggaatattcagaggtggaaaccttccgtgggaattaactggaatatatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1479052 True 277 lncRNA 0.41 2 44435267 44436862

Neighbor

gene id symbol gene type direction distance location
cblb cblb coding upstream 109021 44173352 ~ 44326246 (+)
nipsnap2 nips2 coding upstream 410684 44005413 ~ 44024583 (+)
mrps17 mrps17 coding upstream 435336 43998013 ~ 43999931 (+)
mntb LOC106602836 coding upstream 716921 43698455 ~ 43718346 (+)
LOC110490730 NA coding upstream 737449 43696212 ~ 43697965 (+)
LOC110490121 LOC106602827 coding downstream 149423 44586285 ~ 44603799 (+)
LOC110490732 LOC106602993 coding downstream 209931 44646793 ~ 44648830 (+)
cldn2 cldn7 coding downstream 282438 44719300 ~ 44721744 (+)
LOC110490127 LOC106602822 coding downstream 298898 44735760 ~ 44848514 (+)
LOC110490129 LOC106602819 coding downstream 501123 44937985 ~ 44993895 (+)
G1296050 NA non-coding upstream 44190 44390482 ~ 44391077 (+)
G1296051 NA non-coding upstream 266432 44168088 ~ 44168835 (+)
G1296030 NA non-coding upstream 282247 44152695 ~ 44153020 (+)
G1295872 NA non-coding upstream 311832 44070986 ~ 44123435 (+)
G1296228 NA non-coding downstream 7207 44444069 ~ 44456091 (+)
G1296282 NA non-coding downstream 130583 44567445 ~ 44573979 (+)
G1296283 NA non-coding downstream 132619 44569481 ~ 44574895 (+)
G1296303 NA non-coding downstream 186759 44623621 ~ 44624085 (+)
G1296304 NA non-coding downstream 187707 44624569 ~ 44624869 (+)
G1295845 NA other upstream 405406 44029436 ~ 44029861 (+)
G1295730 NA other upstream 518788 43916178 ~ 43916479 (+)
G1295348 LOC106602853 other upstream 837803 43596924 ~ 43597464 (+)
G1294319 NA other upstream 1667330 42764853 ~ 42767937 (+)
G1296266 LOC106602826 other downstream 110317 44547179 ~ 44581048 (+)
G1296185 NA other downstream 212839 44649701 ~ 44652079 (+)
G1298452 NA other downstream 1817477 46254339 ~ 46260437 (+)
brd1a LOC106575995 other downstream 1877390 46293582 ~ 46316075 (+)
G1299894 NA other downstream 3132968 47569830 ~ 47570663 (+)

Expression


Co-expression Network