G1296303


Basic Information

Item Value
gene id G1296303
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 44623621 ~ 44624085 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1479147
GTTGTGATGCTAGTCAGGAGggagggtgcaggcagcgatcggttgaagatcatgcacttagttttactagcatttaaaagcagttggaggccacggaaggagtgttgtatggcattgaagcgcgtttggaggtttgttaacacagtgtccaaagaagggccagatgtatacagaatggtgtcgtctgcgtagatgtggatcagggagtcacccgcagcaagagcgacgtcgttgatatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatacaaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacaacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcacaattattcagcccccttaagttaatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1479147 True 465 lncRNA 0.43 1 44623621 44624085

Neighbor

gene id symbol gene type direction distance location
LOC110490121 LOC106602827 coding upstream 19822 44586285 ~ 44603799 (+)
cblb cblb coding upstream 297375 44173352 ~ 44326246 (+)
nipsnap2 nips2 coding upstream 599038 44005413 ~ 44024583 (+)
mrps17 mrps17 coding upstream 623690 43998013 ~ 43999931 (+)
mntb LOC106602836 coding upstream 905275 43698455 ~ 43718346 (+)
LOC110490732 LOC106602993 coding downstream 22708 44646793 ~ 44648830 (+)
cldn2 cldn7 coding downstream 95215 44719300 ~ 44721744 (+)
LOC110490127 LOC106602822 coding downstream 111675 44735760 ~ 44848514 (+)
LOC110490129 LOC106602819 coding downstream 313900 44937985 ~ 44993895 (+)
LOC110490132 LOC106602816 coding downstream 466060 45090145 ~ 45151980 (+)
G1296182 NA non-coding upstream 9808 44397871 ~ 44613813 (+)
G1296283 NA non-coding upstream 48726 44569481 ~ 44574895 (+)
G1296282 NA non-coding upstream 49642 44567445 ~ 44573979 (+)
G1296228 NA non-coding upstream 167530 44444069 ~ 44456091 (+)
G1296227 NA non-coding upstream 186759 44435267 ~ 44436862 (+)
G1296304 NA non-coding downstream 484 44624569 ~ 44624869 (+)
G1296307 NA non-coding downstream 5768 44629853 ~ 44630112 (+)
G1296186 NA non-coding downstream 28162 44652247 ~ 44654702 (+)
G1296189 prrg3 non-coding downstream 30830 44654915 ~ 44656628 (+)
G1296322 NA non-coding downstream 36392 44660477 ~ 44660710 (+)
G1296266 LOC106602826 other upstream 42573 44547179 ~ 44581048 (+)
G1295845 NA other upstream 593760 44029436 ~ 44029861 (+)
G1295730 NA other upstream 707142 43916178 ~ 43916479 (+)
G1295348 LOC106602853 other upstream 1026157 43596924 ~ 43597464 (+)
G1296185 NA other downstream 25616 44649701 ~ 44652079 (+)
G1298452 NA other downstream 1630254 46254339 ~ 46260437 (+)
brd1a LOC106575995 other downstream 1690167 46293582 ~ 46316075 (+)
G1299894 NA other downstream 2945745 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 3322283 47946368 ~ 47947892 (+)

Expression


Co-expression Network