Gene
RNA
| Item | Value |
|---|---|
| gene id | G1296307 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 44629853 ~ 44630112 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1479151 | True | 260 | lncRNA | 0.44 | 1 | 44629853 | 44630112 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490121 | LOC106602827 | coding | upstream | 26054 | 44586285 ~ 44603799 (+) |
| cblb | cblb | coding | upstream | 303607 | 44173352 ~ 44326246 (+) |
| nipsnap2 | nips2 | coding | upstream | 605270 | 44005413 ~ 44024583 (+) |
| mrps17 | mrps17 | coding | upstream | 629922 | 43998013 ~ 43999931 (+) |
| mntb | LOC106602836 | coding | upstream | 911507 | 43698455 ~ 43718346 (+) |
| LOC110490732 | LOC106602993 | coding | downstream | 16681 | 44646793 ~ 44648830 (+) |
| cldn2 | cldn7 | coding | downstream | 89188 | 44719300 ~ 44721744 (+) |
| LOC110490127 | LOC106602822 | coding | downstream | 105648 | 44735760 ~ 44848514 (+) |
| LOC110490129 | LOC106602819 | coding | downstream | 307873 | 44937985 ~ 44993895 (+) |
| LOC110490132 | LOC106602816 | coding | downstream | 460033 | 45090145 ~ 45151980 (+) |
| G1296304 | NA | non-coding | upstream | 4984 | 44624569 ~ 44624869 (+) |
| G1296303 | NA | non-coding | upstream | 5768 | 44623621 ~ 44624085 (+) |
| G1296283 | NA | non-coding | upstream | 54958 | 44569481 ~ 44574895 (+) |
| G1296282 | NA | non-coding | upstream | 55874 | 44567445 ~ 44573979 (+) |
| G1296228 | NA | non-coding | upstream | 173762 | 44444069 ~ 44456091 (+) |
| G1296186 | NA | non-coding | downstream | 22135 | 44652247 ~ 44654702 (+) |
| G1296189 | prrg3 | non-coding | downstream | 24803 | 44654915 ~ 44656628 (+) |
| G1296322 | NA | non-coding | downstream | 30365 | 44660477 ~ 44660710 (+) |
| G1296324 | prrg3 | non-coding | downstream | 32720 | 44662832 ~ 44663251 (+) |
| G1296331 | NA | non-coding | downstream | 40573 | 44670685 ~ 44671027 (+) |
| G1296266 | LOC106602826 | other | upstream | 48805 | 44547179 ~ 44581048 (+) |
| G1295845 | NA | other | upstream | 599992 | 44029436 ~ 44029861 (+) |
| G1295730 | NA | other | upstream | 713374 | 43916178 ~ 43916479 (+) |
| G1295348 | LOC106602853 | other | upstream | 1032389 | 43596924 ~ 43597464 (+) |
| G1296185 | NA | other | downstream | 19589 | 44649701 ~ 44652079 (+) |
| G1298452 | NA | other | downstream | 1624227 | 46254339 ~ 46260437 (+) |
| brd1a | LOC106575995 | other | downstream | 1684140 | 46293582 ~ 46316075 (+) |
| G1299894 | NA | other | downstream | 2939718 | 47569830 ~ 47570663 (+) |
| G1300598 | LOC106575986 | other | downstream | 3316256 | 47946368 ~ 47947892 (+) |
