Gene
RNA
| Item | Value |
|---|---|
| gene id | G1296322 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 44660477 ~ 44660710 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1479167 | True | 234 | lncRNA | 0.35 | 1 | 44660477 | 44660710 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490732 | LOC106602993 | coding | upstream | 11647 | 44646793 ~ 44648830 (+) |
| LOC110490121 | LOC106602827 | coding | upstream | 56678 | 44586285 ~ 44603799 (+) |
| cblb | cblb | coding | upstream | 334231 | 44173352 ~ 44326246 (+) |
| nipsnap2 | nips2 | coding | upstream | 635894 | 44005413 ~ 44024583 (+) |
| mrps17 | mrps17 | coding | upstream | 660546 | 43998013 ~ 43999931 (+) |
| cldn2 | cldn7 | coding | downstream | 58590 | 44719300 ~ 44721744 (+) |
| LOC110490127 | LOC106602822 | coding | downstream | 75050 | 44735760 ~ 44848514 (+) |
| LOC110490129 | LOC106602819 | coding | downstream | 277275 | 44937985 ~ 44993895 (+) |
| LOC110490132 | LOC106602816 | coding | downstream | 429435 | 45090145 ~ 45151980 (+) |
| LOC110490134 | LOC106602815 | coding | downstream | 497359 | 45158069 ~ 45174534 (+) |
| G1296189 | prrg3 | non-coding | upstream | 3849 | 44654915 ~ 44656628 (+) |
| G1296186 | NA | non-coding | upstream | 5775 | 44652247 ~ 44654702 (+) |
| G1296307 | NA | non-coding | upstream | 30365 | 44629853 ~ 44630112 (+) |
| G1296304 | NA | non-coding | upstream | 35608 | 44624569 ~ 44624869 (+) |
| G1296303 | NA | non-coding | upstream | 36392 | 44623621 ~ 44624085 (+) |
| G1296324 | prrg3 | non-coding | downstream | 2122 | 44662832 ~ 44663251 (+) |
| G1296331 | NA | non-coding | downstream | 9975 | 44670685 ~ 44671027 (+) |
| G1296334 | NA | non-coding | downstream | 15040 | 44675750 ~ 44676043 (+) |
| G1296410 | NA | non-coding | downstream | 200345 | 44861055 ~ 44861335 (+) |
| G1296412 | NA | non-coding | downstream | 202842 | 44863552 ~ 44866078 (+) |
| G1296185 | NA | other | upstream | 8398 | 44649701 ~ 44652079 (+) |
| G1296266 | LOC106602826 | other | upstream | 79429 | 44547179 ~ 44581048 (+) |
| G1295845 | NA | other | upstream | 630616 | 44029436 ~ 44029861 (+) |
| G1295730 | NA | other | upstream | 743998 | 43916178 ~ 43916479 (+) |
| G1298452 | NA | other | downstream | 1593629 | 46254339 ~ 46260437 (+) |
| brd1a | LOC106575995 | other | downstream | 1653542 | 46293582 ~ 46316075 (+) |
| G1299894 | NA | other | downstream | 2909120 | 47569830 ~ 47570663 (+) |
| G1300598 | LOC106575986 | other | downstream | 3285658 | 47946368 ~ 47947892 (+) |
| kiss2 | kiss2 | other | downstream | 3699118 | 48359799 ~ 48360553 (+) |
