G1296331


Basic Information

Item Value
gene id G1296331
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 44670685 ~ 44671027 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1479176
gagtgggccaaaatccctgctgcagtgtgtgcaaacctggtcaacaactacaggaaacatatgatctctgtaattgcaaacaaaggttctgtaccaaatattaagttctgcttttctgatgtatcaaatacttatgtcatgcaataaaatgcaaattaaattCTTATAAATAATTCAAtgaaattttctggatttttgttttagattccgtctctcacagttgaagtgtacctatgataaaaatgacagacctctacattacagacctctacaaattacagacctctacttGCAGGAAAACCTGCataatcggcagtgtatcaaattatgtggttctccccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1479176 True 343 lncRNA 0.36 1 44670685 44671027

Neighbor

gene id symbol gene type direction distance location
LOC110490732 LOC106602993 coding upstream 21855 44646793 ~ 44648830 (+)
LOC110490121 LOC106602827 coding upstream 66886 44586285 ~ 44603799 (+)
cblb cblb coding upstream 344439 44173352 ~ 44326246 (+)
nipsnap2 nips2 coding upstream 646102 44005413 ~ 44024583 (+)
mrps17 mrps17 coding upstream 670754 43998013 ~ 43999931 (+)
cldn2 cldn7 coding downstream 48273 44719300 ~ 44721744 (+)
LOC110490127 LOC106602822 coding downstream 64733 44735760 ~ 44848514 (+)
LOC110490129 LOC106602819 coding downstream 266958 44937985 ~ 44993895 (+)
LOC110490132 LOC106602816 coding downstream 419118 45090145 ~ 45151980 (+)
LOC110490134 LOC106602815 coding downstream 487042 45158069 ~ 45174534 (+)
G1296324 prrg3 non-coding upstream 7434 44662832 ~ 44663251 (+)
G1296322 NA non-coding upstream 9975 44660477 ~ 44660710 (+)
G1296189 prrg3 non-coding upstream 14057 44654915 ~ 44656628 (+)
G1296186 NA non-coding upstream 15983 44652247 ~ 44654702 (+)
G1296307 NA non-coding upstream 40573 44629853 ~ 44630112 (+)
G1296334 NA non-coding downstream 4723 44675750 ~ 44676043 (+)
G1296410 NA non-coding downstream 190028 44861055 ~ 44861335 (+)
G1296412 NA non-coding downstream 192525 44863552 ~ 44866078 (+)
G1296446 NA non-coding downstream 253845 44924872 ~ 44925086 (+)
G1296452 NA non-coding downstream 260024 44931051 ~ 44931610 (+)
G1296185 NA other upstream 18606 44649701 ~ 44652079 (+)
G1296266 LOC106602826 other upstream 89637 44547179 ~ 44581048 (+)
G1295845 NA other upstream 640824 44029436 ~ 44029861 (+)
G1295730 NA other upstream 754206 43916178 ~ 43916479 (+)
G1298452 NA other downstream 1583312 46254339 ~ 46260437 (+)
brd1a LOC106575995 other downstream 1643225 46293582 ~ 46316075 (+)
G1299894 NA other downstream 2898803 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 3275341 47946368 ~ 47947892 (+)
kiss2 kiss2 other downstream 3688801 48359799 ~ 48360553 (+)

Expression


Co-expression Network