G1296481


Basic Information

Item Value
gene id G1296481
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 44986018 ~ 44986472 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1479337
AGAGAGATATATGAAGGGGTGGGATGGAGAGATTTAGTTGTGAGCAGGGGTGGGAagaatggagggatgaaaggatgGGATGGATTTAGTTGTTAGCAGGTGGGAAGGATGGCGGGATGAAAGGATGGGATGGATTTAGTTGTTAGCAGgtgggaaggatggagggatgaaaggatgAACGATAGAGATATACTGTATGAAGGGATGCCATGGATTTAGTTATGAGCAGGGGTGggaatgatggagggatggagggatttaGTTGTGAGCAGGGTTGggaatgatggagggatggagggatttaGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1479337 True 308 lncRNA 0.48 2 44986018 44986472

Neighbor

gene id symbol gene type direction distance location
LOC110490127 LOC106602822 coding upstream 137504 44735760 ~ 44848514 (+)
cldn2 cldn7 coding upstream 264274 44719300 ~ 44721744 (+)
LOC110490732 LOC106602993 coding upstream 337188 44646793 ~ 44648830 (+)
LOC110490121 LOC106602827 coding upstream 382219 44586285 ~ 44603799 (+)
cblb cblb coding upstream 659772 44173352 ~ 44326246 (+)
LOC110490132 LOC106602816 coding downstream 103673 45090145 ~ 45151980 (+)
LOC110490134 LOC106602815 coding downstream 171597 45158069 ~ 45174534 (+)
LOC110490135 NA coding downstream 206421 45192893 ~ 45196185 (+)
LOC118938959 NA coding downstream 300269 45286741 ~ 45286928 (+)
LOC118938961 NA coding downstream 300697 45287169 ~ 45287285 (+)
G1296462 NA non-coding upstream 6727 44945562 ~ 44979291 (+)
G1296452 NA non-coding upstream 54408 44931051 ~ 44931610 (+)
G1296446 NA non-coding upstream 60932 44924872 ~ 44925086 (+)
G1296412 NA non-coding upstream 119940 44863552 ~ 44866078 (+)
G1296410 NA non-coding upstream 124683 44861055 ~ 44861335 (+)
G1296527 NA non-coding downstream 105964 45092436 ~ 45144752 (+)
G1296611 NA non-coding downstream 203622 45190094 ~ 45191164 (+)
G1296623 NA non-coding downstream 222337 45208809 ~ 45209014 (+)
G1296689 NA non-coding downstream 337048 45323520 ~ 45323774 (+)
G1296185 NA other upstream 333939 44649701 ~ 44652079 (+)
G1296266 LOC106602826 other upstream 404970 44547179 ~ 44581048 (+)
G1295845 NA other upstream 956157 44029436 ~ 44029861 (+)
G1295730 NA other upstream 1069539 43916178 ~ 43916479 (+)
G1298452 NA other downstream 1267867 46254339 ~ 46260437 (+)
brd1a LOC106575995 other downstream 1327780 46293582 ~ 46316075 (+)
G1299894 NA other downstream 2583358 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 2959896 47946368 ~ 47947892 (+)
kiss2 kiss2 other downstream 3373356 48359799 ~ 48360553 (+)

Expression


Co-expression Network