G1297355


Basic Information

Item Value
gene id G1297355
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 45334031 ~ 45334294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1480345
GGAATATATAATATTTTAAATAAAAATCTACAGTGGCGCCTTTCCTCTTGTTTGGAAAATAAAAACAGCTTTTGACACGGGTTTCCAAATGTGAACATGGATTGCTGTCGGTAACATTCAACAATGTGATATTAAACAacagagtgagagtgagaaaacagccaaggaagtgagagaacagccaaggaagtgagagaacagccaaggaagtgagagaacagccaaggaagtgaagggaacagccaaggaagtgagagaacagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1480345 True 264 lncRNA 0.41 1 45334031 45334294

Neighbor

gene id symbol gene type direction distance location
LOC110490136 NA coding upstream 34536 45296536 ~ 45299495 (+)
LOC118938961 NA coding upstream 46746 45287169 ~ 45287285 (+)
LOC118938959 NA coding upstream 47103 45286741 ~ 45286928 (+)
LOC110490135 NA coding upstream 137846 45192893 ~ 45196185 (+)
LOC110490134 LOC106602815 coding upstream 159497 45158069 ~ 45174534 (+)
LOC110490137 NA coding downstream 4256 45338550 ~ 45376332 (+)
wnt7ba LOC106575957 coding downstream 244608 45578902 ~ 45595245 (+)
LOC110490148 NA coding downstream 384148 45718442 ~ 45762394 (+)
LOC110490150 LOC106575953 coding downstream 428482 45762776 ~ 45790354 (+)
LOC110490152 LOC106575950 coding downstream 456345 45790639 ~ 45831089 (+)
G1296689 NA non-coding upstream 10257 45323520 ~ 45323774 (+)
G1296623 NA non-coding upstream 125017 45208809 ~ 45209014 (+)
G1296611 NA non-coding upstream 142867 45190094 ~ 45191164 (+)
G1296527 NA non-coding upstream 189279 45092436 ~ 45144752 (+)
LOC110490132 LOC106602816 non-coding upstream 237510 45090145 ~ 45151980 (+)
G1297413 NA non-coding downstream 85126 45419420 ~ 45419642 (+)
G1297416 NA non-coding downstream 95911 45430205 ~ 45430471 (+)
G1297458 NA non-coding downstream 163122 45497416 ~ 45500415 (+)
G1297452 NA non-coding downstream 183915 45518209 ~ 45518558 (+)
G1297494 NA non-coding downstream 219387 45553681 ~ 45553952 (+)
G1296185 NA other upstream 681952 44649701 ~ 44652079 (+)
G1296266 LOC106602826 other upstream 752983 44547179 ~ 44581048 (+)
cblb cblb other upstream 1007852 44173352 ~ 44326246 (+)
G1295845 NA other upstream 1304170 44029436 ~ 44029861 (+)
G1295730 NA other upstream 1417552 43916178 ~ 43916479 (+)
G1298452 NA other downstream 920045 46254339 ~ 46260437 (+)
brd1a LOC106575995 other downstream 979958 46293582 ~ 46316075 (+)
G1299894 NA other downstream 2235536 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 2612074 47946368 ~ 47947892 (+)
kiss2 kiss2 other downstream 3025534 48359799 ~ 48360553 (+)

Expression


Co-expression Network