G1297416


Basic Information

Item Value
gene id G1297416
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 45430205 ~ 45430471 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1480410
aacatttccctcactaactttaaacatcagctatctgagcagctaaccgattgctgcagctgtacatagtccatctgtaaatagcccacccaatctacctacctcatccccatattgtttttatttactttgctgctcttttgcacaccagtatcactacttacacaccatcatctgctcatcatcatctgctcatctatcactccagtgttaatctgctaaattgtaatactTTGCCactattgccttacctcctcatgccatttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1480410 True 267 lncRNA 0.41 1 45430205 45430471

Neighbor

gene id symbol gene type direction distance location
LOC110490137 NA coding upstream 53873 45338550 ~ 45376332 (+)
LOC110490136 NA coding upstream 130710 45296536 ~ 45299495 (+)
LOC118938961 NA coding upstream 142920 45287169 ~ 45287285 (+)
LOC118938959 NA coding upstream 143277 45286741 ~ 45286928 (+)
LOC110490135 NA coding upstream 234020 45192893 ~ 45196185 (+)
wnt7ba LOC106575957 coding downstream 148431 45578902 ~ 45595245 (+)
LOC110490148 NA coding downstream 287971 45718442 ~ 45762394 (+)
LOC110490150 LOC106575953 coding downstream 332305 45762776 ~ 45790354 (+)
LOC110490152 LOC106575950 coding downstream 360168 45790639 ~ 45831089 (+)
il17rel LOC106575998 coding downstream 471612 45902083 ~ 45938805 (+)
G1297413 NA non-coding upstream 10563 45419420 ~ 45419642 (+)
G1297355 NA non-coding upstream 95911 45334031 ~ 45334294 (+)
G1296689 NA non-coding upstream 106431 45323520 ~ 45323774 (+)
G1296623 NA non-coding upstream 221191 45208809 ~ 45209014 (+)
G1296611 NA non-coding upstream 239041 45190094 ~ 45191164 (+)
G1297458 NA non-coding downstream 66945 45497416 ~ 45500415 (+)
G1297452 NA non-coding downstream 87738 45518209 ~ 45518558 (+)
G1297494 NA non-coding downstream 123210 45553681 ~ 45553952 (+)
G1297500 NA non-coding downstream 129364 45559835 ~ 45560114 (+)
G1297505 NA non-coding downstream 139087 45569558 ~ 45569869 (+)
G1296185 NA other upstream 778126 44649701 ~ 44652079 (+)
G1296266 LOC106602826 other upstream 849157 44547179 ~ 44581048 (+)
cblb cblb other upstream 1104026 44173352 ~ 44326246 (+)
G1295845 NA other upstream 1400344 44029436 ~ 44029861 (+)
G1295730 NA other upstream 1513726 43916178 ~ 43916479 (+)
G1298452 NA other downstream 823868 46254339 ~ 46260437 (+)
brd1a LOC106575995 other downstream 883781 46293582 ~ 46316075 (+)
G1299894 NA other downstream 2139359 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 2515897 47946368 ~ 47947892 (+)
kiss2 kiss2 other downstream 2929357 48359799 ~ 48360553 (+)

Expression


Co-expression Network