G1297500


Basic Information

Item Value
gene id G1297500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 45559835 ~ 45560114 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1480500
TGAACTACTAAGAGACTCTTAGTTTTCTTTTGATCACTGATCCCGAGAATCCCCGTATCTTAGGGTACCCCTGGCTAGCGTTACATAACCCACTATTCTCCTGGTTCACAGGACACCTACTAGACTGGGATAAGGACTGACAGACTAAACGTTCTAAGACCCCCACCAAGAGCCTCGTCGTGTCCTCCTGCATCCATTGAAGACCAAGActtctccactctccctcttGAATACTTCAACCTCTGGGAGGCCTTCATTAGGAGGCAAGCCGTCATCCTTC

Function

NR:

description
Pol polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1480500 True 280 lncRNA 0.49 1 45559835 45560114

Neighbor

gene id symbol gene type direction distance location
LOC110490137 NA coding upstream 183503 45338550 ~ 45376332 (+)
LOC110490136 NA coding upstream 260340 45296536 ~ 45299495 (+)
LOC118938961 NA coding upstream 272550 45287169 ~ 45287285 (+)
LOC118938959 NA coding upstream 272907 45286741 ~ 45286928 (+)
LOC110490135 NA coding upstream 363650 45192893 ~ 45196185 (+)
wnt7ba LOC106575957 coding downstream 18788 45578902 ~ 45595245 (+)
LOC110490148 NA coding downstream 158328 45718442 ~ 45762394 (+)
LOC110490150 LOC106575953 coding downstream 202662 45762776 ~ 45790354 (+)
LOC110490152 LOC106575950 coding downstream 230525 45790639 ~ 45831089 (+)
il17rel LOC106575998 coding downstream 341969 45902083 ~ 45938805 (+)
G1297494 NA non-coding upstream 5883 45553681 ~ 45553952 (+)
G1297452 NA non-coding upstream 41277 45518209 ~ 45518558 (+)
G1297458 NA non-coding upstream 59420 45497416 ~ 45500415 (+)
G1297416 NA non-coding upstream 129364 45430205 ~ 45430471 (+)
G1297413 NA non-coding upstream 140193 45419420 ~ 45419642 (+)
G1297505 NA non-coding downstream 9444 45569558 ~ 45569869 (+)
G1297523 NA non-coding downstream 32710 45592824 ~ 45593023 (+)
G1297675 NA non-coding downstream 51426 45611540 ~ 45611778 (+)
G1297679 NA non-coding downstream 52564 45612678 ~ 45612909 (+)
G1297935 NA non-coding downstream 495779 46055893 ~ 46083785 (+)
G1296185 NA other upstream 907756 44649701 ~ 44652079 (+)
G1296266 LOC106602826 other upstream 978787 44547179 ~ 44581048 (+)
cblb cblb other upstream 1233656 44173352 ~ 44326246 (+)
G1295845 NA other upstream 1529974 44029436 ~ 44029861 (+)
G1295730 NA other upstream 1643356 43916178 ~ 43916479 (+)
G1298452 NA other downstream 694225 46254339 ~ 46260437 (+)
brd1a LOC106575995 other downstream 754138 46293582 ~ 46316075 (+)
G1299894 NA other downstream 2009716 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 2386254 47946368 ~ 47947892 (+)
kiss2 kiss2 other downstream 2799714 48359799 ~ 48360553 (+)

Expression


Co-expression Network