Gene
RNA
| Item | Value |
|---|---|
| gene id | G1297679 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 45612678 ~ 45612909 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1480684 | True | 232 | lncRNA | 0.44 | 1 | 45612678 | 45612909 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| wnt7ba | LOC106575957 | coding | upstream | 17433 | 45578902 ~ 45595245 (+) |
| LOC110490137 | NA | coding | upstream | 236346 | 45338550 ~ 45376332 (+) |
| LOC110490136 | NA | coding | upstream | 313183 | 45296536 ~ 45299495 (+) |
| LOC118938961 | NA | coding | upstream | 325393 | 45287169 ~ 45287285 (+) |
| LOC118938959 | NA | coding | upstream | 325750 | 45286741 ~ 45286928 (+) |
| LOC110490148 | NA | coding | downstream | 105533 | 45718442 ~ 45762394 (+) |
| LOC110490150 | LOC106575953 | coding | downstream | 149867 | 45762776 ~ 45790354 (+) |
| LOC110490152 | LOC106575950 | coding | downstream | 177730 | 45790639 ~ 45831089 (+) |
| il17rel | LOC106575998 | coding | downstream | 289174 | 45902083 ~ 45938805 (+) |
| LOC110490155 | pim3 | coding | downstream | 555462 | 46168371 ~ 46172817 (+) |
| G1297675 | NA | non-coding | upstream | 900 | 45611540 ~ 45611778 (+) |
| G1297523 | NA | non-coding | upstream | 19655 | 45592824 ~ 45593023 (+) |
| G1297505 | NA | non-coding | upstream | 42809 | 45569558 ~ 45569869 (+) |
| G1297500 | NA | non-coding | upstream | 52564 | 45559835 ~ 45560114 (+) |
| G1297494 | NA | non-coding | upstream | 58726 | 45553681 ~ 45553952 (+) |
| G1297935 | NA | non-coding | downstream | 442984 | 46055893 ~ 46083785 (+) |
| G1298287 | NA | non-coding | downstream | 498395 | 46111304 ~ 46111572 (+) |
| G1298293 | NA | non-coding | downstream | 501604 | 46114513 ~ 46114801 (+) |
| G1298296 | NA | non-coding | downstream | 502680 | 46115589 ~ 46115957 (+) |
| G1298318 | NA | non-coding | downstream | 517337 | 46130246 ~ 46130475 (+) |
| G1296185 | NA | other | upstream | 960599 | 44649701 ~ 44652079 (+) |
| G1296266 | LOC106602826 | other | upstream | 1031630 | 44547179 ~ 44581048 (+) |
| cblb | cblb | other | upstream | 1286499 | 44173352 ~ 44326246 (+) |
| G1295845 | NA | other | upstream | 1582817 | 44029436 ~ 44029861 (+) |
| G1295730 | NA | other | upstream | 1696199 | 43916178 ~ 43916479 (+) |
| G1298452 | NA | other | downstream | 641430 | 46254339 ~ 46260437 (+) |
| brd1a | LOC106575995 | other | downstream | 701343 | 46293582 ~ 46316075 (+) |
| G1299894 | NA | other | downstream | 1956921 | 47569830 ~ 47570663 (+) |
| G1300598 | LOC106575986 | other | downstream | 2333459 | 47946368 ~ 47947892 (+) |
| kiss2 | kiss2 | other | downstream | 2746919 | 48359799 ~ 48360553 (+) |
