G1298293


Basic Information

Item Value
gene id G1298293
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 46114513 ~ 46114801 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1481347
taggtattcctcttgtccagatgggttagggcagtgtgcagtggtggttgcgattgcgtcgtctgtggacctattggggcggtaattaaattggagtgggtctagggtgtcaggtagggtggaggtgatatggtccttgactagtctctcaaagcacttcatgatgacggaagtgagtgctacagggcggtagtcatttagatcagttaccttagctttcttgggaacagggacaatggtggccctcttgaagcatgtgggaaatgcagactgggataaggattgattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1481347 True 289 lncRNA 0.49 1 46114513 46114801

Neighbor

gene id symbol gene type direction distance location
il17rel LOC106575998 coding upstream 175708 45902083 ~ 45938805 (+)
LOC110490152 LOC106575950 coding upstream 283424 45790639 ~ 45831089 (+)
LOC110490150 LOC106575953 coding upstream 324159 45762776 ~ 45790354 (+)
LOC110490148 NA coding upstream 352119 45718442 ~ 45762394 (+)
wnt7ba LOC106575957 coding upstream 519268 45578902 ~ 45595245 (+)
LOC110490155 pim3 coding downstream 53570 46168371 ~ 46172817 (+)
alg12 alg12 coding downstream 145792 46260593 ~ 46268733 (+)
brd1a LOC106575995 coding downstream 178781 46293582 ~ 46316075 (+)
cerk LOC106575992 coding downstream 1297636 47412437 ~ 47443051 (+)
srr LOC106575990 coding downstream 1604117 47717685 ~ 47723038 (+)
G1298287 NA non-coding upstream 2941 46111304 ~ 46111572 (+)
G1297935 NA non-coding upstream 30728 46055893 ~ 46083785 (+)
G1297679 NA non-coding upstream 501604 45612678 ~ 45612909 (+)
G1297675 NA non-coding upstream 502735 45611540 ~ 45611778 (+)
G1297523 NA non-coding upstream 521490 45592824 ~ 45593023 (+)
G1298296 NA non-coding downstream 788 46115589 ~ 46115957 (+)
G1298318 NA non-coding downstream 15445 46130246 ~ 46130475 (+)
G1298347 NA non-coding downstream 38027 46152828 ~ 46153112 (+)
G1298396 NA non-coding downstream 84554 46199355 ~ 46199713 (+)
G1298422 NA non-coding downstream 106913 46221714 ~ 46221940 (+)
G1296185 NA other upstream 1462434 44649701 ~ 44652079 (+)
G1296266 LOC106602826 other upstream 1533465 44547179 ~ 44581048 (+)
cblb cblb other upstream 1788334 44173352 ~ 44326246 (+)
G1295845 NA other upstream 2084652 44029436 ~ 44029861 (+)
G1295730 NA other upstream 2198034 43916178 ~ 43916479 (+)
G1298452 NA other downstream 139538 46254339 ~ 46260437 (+)
G1299894 NA other downstream 1455029 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 1831567 47946368 ~ 47947892 (+)
kiss2 kiss2 other downstream 2245027 48359799 ~ 48360553 (+)

Expression


Co-expression Network