G1298422


Basic Information

Item Value
gene id G1298422
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 46221714 ~ 46221940 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1481485
TTTTTGTACGTTTCATTCGCAACTACAGCCATCTGGCAGcacctcacctccacctccactccaTTCCACTGAAATCCTGAGGCAGAGGCAGCATTCCTGGAACTCAAGCGTCGCTTCACCTACGCTCCGGTCCTTACTCAGCCTGACCCAGAACTCCAGTGGAGGTGGATGCCTCTAAAACCAGGGTAAGTGCTGTTCTGTCTCAACGTTCCCCCTCTGATCAGAAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106586555

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1481485 True 227 lncRNA 0.53 1 46221714 46221940

Neighbor

gene id symbol gene type direction distance location
LOC110490155 pim3 coding upstream 48897 46168371 ~ 46172817 (+)
il17rel LOC106575998 coding upstream 282909 45902083 ~ 45938805 (+)
LOC110490152 LOC106575950 coding upstream 390625 45790639 ~ 45831089 (+)
LOC110490150 LOC106575953 coding upstream 431360 45762776 ~ 45790354 (+)
LOC110490148 NA coding upstream 459320 45718442 ~ 45762394 (+)
alg12 alg12 coding downstream 38653 46260593 ~ 46268733 (+)
brd1a LOC106575995 coding downstream 71642 46293582 ~ 46316075 (+)
cerk LOC106575992 coding downstream 1190497 47412437 ~ 47443051 (+)
srr LOC106575990 coding downstream 1496978 47717685 ~ 47723038 (+)
alg10 LOC106575988 coding downstream 1511579 47733519 ~ 47736943 (+)
G1298396 NA non-coding upstream 22001 46199355 ~ 46199713 (+)
G1298347 NA non-coding upstream 68602 46152828 ~ 46153112 (+)
G1298318 NA non-coding upstream 91239 46130246 ~ 46130475 (+)
G1298296 NA non-coding upstream 105757 46115589 ~ 46115957 (+)
G1298293 NA non-coding upstream 106913 46114513 ~ 46114801 (+)
G1298423 NA non-coding downstream 1892 46223832 ~ 46224041 (+)
G1298424 NA non-coding downstream 2698 46224638 ~ 46224852 (+)
G1298452 NA non-coding downstream 32399 46254339 ~ 46260437 (+)
G1298495 NA non-coding downstream 122977 46344917 ~ 46345288 (+)
G1298496 NA non-coding downstream 123928 46345868 ~ 46346080 (+)
G1296185 NA other upstream 1569635 44649701 ~ 44652079 (+)
G1296266 LOC106602826 other upstream 1640666 44547179 ~ 44581048 (+)
cblb cblb other upstream 1895535 44173352 ~ 44326246 (+)
G1295845 NA other upstream 2191853 44029436 ~ 44029861 (+)
G1295730 NA other upstream 2305235 43916178 ~ 43916479 (+)
G1299894 NA other downstream 1347890 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 1724428 47946368 ~ 47947892 (+)
kiss2 kiss2 other downstream 2137888 48359799 ~ 48360553 (+)

Expression


Co-expression Network