G1298424


Basic Information

Item Value
gene id G1298424
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 46224638 ~ 46224852 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1481487
GTTTAGCTTTCTAGCACAGTCACTAATTTgaaaacaattaacaagctagttaACTGCCAtatgttcttgtcaaactgtaAACAGAGTAGCAAGCAACAAGAGATTCCAAATAACAGTCTAAACTACTTCAGGGTAAATAAATCAGAATTGACTGTtcagatacaaatctgattcctggccatgtgaATTGTATTTGAATTggttttgaaatatcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1481487 True 215 lncRNA 0.33 1 46224638 46224852

Neighbor

gene id symbol gene type direction distance location
LOC110490155 pim3 coding upstream 51821 46168371 ~ 46172817 (+)
il17rel LOC106575998 coding upstream 285833 45902083 ~ 45938805 (+)
LOC110490152 LOC106575950 coding upstream 393549 45790639 ~ 45831089 (+)
LOC110490150 LOC106575953 coding upstream 434284 45762776 ~ 45790354 (+)
LOC110490148 NA coding upstream 462244 45718442 ~ 45762394 (+)
alg12 alg12 coding downstream 35741 46260593 ~ 46268733 (+)
brd1a LOC106575995 coding downstream 68730 46293582 ~ 46316075 (+)
cerk LOC106575992 coding downstream 1187585 47412437 ~ 47443051 (+)
srr LOC106575990 coding downstream 1494066 47717685 ~ 47723038 (+)
alg10 LOC106575988 coding downstream 1508667 47733519 ~ 47736943 (+)
G1298423 NA non-coding upstream 597 46223832 ~ 46224041 (+)
G1298422 NA non-coding upstream 2698 46221714 ~ 46221940 (+)
G1298396 NA non-coding upstream 24925 46199355 ~ 46199713 (+)
G1298347 NA non-coding upstream 71526 46152828 ~ 46153112 (+)
G1298318 NA non-coding upstream 94163 46130246 ~ 46130475 (+)
G1298452 NA non-coding downstream 29487 46254339 ~ 46260437 (+)
G1298495 NA non-coding downstream 120065 46344917 ~ 46345288 (+)
G1298496 NA non-coding downstream 121016 46345868 ~ 46346080 (+)
G1298603 NA non-coding downstream 151968 46376820 ~ 46377155 (+)
G1298604 NA non-coding downstream 152383 46377235 ~ 46377447 (+)
G1296185 NA other upstream 1572559 44649701 ~ 44652079 (+)
G1296266 LOC106602826 other upstream 1643590 44547179 ~ 44581048 (+)
cblb cblb other upstream 1898459 44173352 ~ 44326246 (+)
G1295845 NA other upstream 2194777 44029436 ~ 44029861 (+)
G1295730 NA other upstream 2308159 43916178 ~ 43916479 (+)
G1299894 NA other downstream 1344978 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 1721516 47946368 ~ 47947892 (+)
kiss2 kiss2 other downstream 2134976 48359799 ~ 48360553 (+)

Expression


Co-expression Network