G1298603


Basic Information

Item Value
gene id G1298603
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 46376820 ~ 46377155 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1481701
atatgtaactttcacacattaacaagtccaatacagcaaatgaaagataaacatattgttaatctacccatcatgtccaatttcaaaaatgctttacagcaaaagcacaacatatgattatgttaggtcatagctaAGTCAATAAAACACAccgccatttttccagccaaagataggagtcacaaaaagcagaaatgtagataaaatgaatcactaacctttgatgatcttcatcagatgccactcataggacatcatgttgcacaatacatgtatgttttgttcgataatgtgcatatttatatccaaaaatttCAGTTTAAATTGGCGCGTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1481701 True 336 lncRNA 0.33 1 46376820 46377155

Neighbor

gene id symbol gene type direction distance location
brd1a LOC106575995 coding upstream 60745 46293582 ~ 46316075 (+)
alg12 alg12 coding upstream 108087 46260593 ~ 46268733 (+)
LOC110490155 pim3 coding upstream 204003 46168371 ~ 46172817 (+)
il17rel LOC106575998 coding upstream 438015 45902083 ~ 45938805 (+)
LOC110490152 LOC106575950 coding upstream 545731 45790639 ~ 45831089 (+)
cerk LOC106575992 coding downstream 1035282 47412437 ~ 47443051 (+)
srr LOC106575990 coding downstream 1341763 47717685 ~ 47723038 (+)
alg10 LOC106575988 coding downstream 1356364 47733519 ~ 47736943 (+)
LOC110490177 NA coding downstream 1621973 47999128 ~ 48001885 (+)
LOC110490734 LOC106576001 coding downstream 1741619 48118774 ~ 48146269 (+)
G1298496 NA non-coding upstream 30740 46345868 ~ 46346080 (+)
G1298495 NA non-coding upstream 31532 46344917 ~ 46345288 (+)
G1298452 NA non-coding upstream 116383 46254339 ~ 46260437 (+)
G1298424 NA non-coding upstream 151968 46224638 ~ 46224852 (+)
G1298423 NA non-coding upstream 152779 46223832 ~ 46224041 (+)
G1298604 NA non-coding downstream 80 46377235 ~ 46377447 (+)
G1298863 NA non-coding downstream 185048 46562203 ~ 46562576 (+)
G1298985 LOC100136012 non-coding downstream 268636 46645791 ~ 46646090 (+)
G1298987 NA non-coding downstream 270489 46647644 ~ 46647950 (+)
G1299003 NA non-coding downstream 290182 46667337 ~ 46667608 (+)
G1296185 NA other upstream 1724741 44649701 ~ 44652079 (+)
G1296266 LOC106602826 other upstream 1795772 44547179 ~ 44581048 (+)
cblb cblb other upstream 2050641 44173352 ~ 44326246 (+)
G1299894 NA other downstream 1192675 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 1569213 47946368 ~ 47947892 (+)
kiss2 kiss2 other downstream 1982673 48359799 ~ 48360553 (+)
G1301200 NA other downstream 2207552 48584707 ~ 48585263 (+)
G1301458 NA other downstream 2552891 48930046 ~ 48930588 (+)

Expression


Co-expression Network