Gene
RNA
| Item | Value |
|---|---|
| gene id | G1299482 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 46888233 ~ 46927791 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1482641 | True | 273 | lncRNA | 0.37 | 2 | 46888233 | 46927791 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490845 | NA | coding | downstream | 169125 | 46717990 ~ 46719108 (-) |
| zbed4 | LOC106575996 | coding | downstream | 612571 | 46268990 ~ 46275662 (-) |
| creld2 | LOC106575997 | coding | downstream | 627743 | 46254337 ~ 46260490 (-) |
| LOC110490153 | LOC106575999 | coding | downstream | 998844 | 45828313 ~ 45889389 (-) |
| LOC110490151 | NA | coding | downstream | 1171091 | 45715991 ~ 45717142 (-) |
| tbc1d22a | tbc1d22a | coding | upstream | 289741 | 47217532 ~ 47405004 (-) |
| gramd4a | LOC106575991 | coding | upstream | 564965 | 47492755 ~ 47559047 (-) |
| celsr1a | LOC106576003 | coding | upstream | 656883 | 47584674 ~ 47707520 (-) |
| trmu | trmu | coding | upstream | 782403 | 47710194 ~ 47719547 (-) |
| tprkb | tprkb | coding | upstream | 800208 | 47727999 ~ 47733441 (-) |
| G1299136 | NA | non-coding | downstream | 127885 | 46759996 ~ 46760348 (-) |
| G1299133 | NA | non-coding | downstream | 129229 | 46758750 ~ 46759004 (-) |
| G1299131 | NA | non-coding | downstream | 130416 | 46757587 ~ 46757817 (-) |
| G1299090 | NA | non-coding | downstream | 157977 | 46729995 ~ 46730256 (-) |
| G1299086 | NA | non-coding | downstream | 160644 | 46727352 ~ 46727589 (-) |
| G1300021 | NA | non-coding | upstream | 269367 | 47197158 ~ 47197438 (-) |
| G1300022 | NA | non-coding | upstream | 269841 | 47197632 ~ 47197887 (-) |
| G1300028 | NA | non-coding | upstream | 276618 | 47204409 ~ 47204657 (-) |
| G1300039 | NA | non-coding | upstream | 293813 | 47221604 ~ 47221824 (-) |
| G1300160 | NA | non-coding | upstream | 498974 | 47426765 ~ 47426969 (-) |
| G1298541 | LOC106575995 | other | downstream | 590281 | 46295361 ~ 46297952 (-) |
| G1298177 | NA | other | downstream | 898970 | 45956059 ~ 45989263 (-) |
| G1298047 | kdm5a | other | downstream | 1125848 | 45752061 ~ 45762385 (-) |
| G1297577 | NA | other | downstream | 1385121 | 45495755 ~ 45503112 (-) |
| cdpf1 | cdpf1 | other | downstream | 1406462 | 45472681 ~ 45481816 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | other | upstream | 1907803 | 48822973 ~ 48839311 (-) |
| G1302602 | NA | other | upstream | 2736160 | 49663951 ~ 49664296 (-) |
| LOC110490244 | LOC106609225 | other | upstream | 3371673 | 50290050 ~ 50301082 (-) |
