Gene
RNA
| Item | Value |
|---|---|
| gene id | G1299296 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 46992500 ~ 46993943 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1482428 | True | 246 | lncRNA | 0.52 | 2 | 46992500 | 46993943 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| brd1a | LOC106575995 | coding | upstream | 676425 | 46293582 ~ 46316075 (+) |
| alg12 | alg12 | coding | upstream | 723767 | 46260593 ~ 46268733 (+) |
| LOC110490155 | pim3 | coding | upstream | 819683 | 46168371 ~ 46172817 (+) |
| il17rel | LOC106575998 | coding | upstream | 1053695 | 45902083 ~ 45938805 (+) |
| LOC110490152 | LOC106575950 | coding | upstream | 1161411 | 45790639 ~ 45831089 (+) |
| cerk | LOC106575992 | coding | downstream | 418494 | 47412437 ~ 47443051 (+) |
| srr | LOC106575990 | coding | downstream | 724975 | 47717685 ~ 47723038 (+) |
| alg10 | LOC106575988 | coding | downstream | 739576 | 47733519 ~ 47736943 (+) |
| LOC110490177 | NA | coding | downstream | 1005185 | 47999128 ~ 48001885 (+) |
| LOC110490734 | LOC106576001 | coding | downstream | 1124831 | 48118774 ~ 48146269 (+) |
| G1299145 | NA | non-coding | upstream | 98800 | 46764574 ~ 46893700 (+) |
| G1299211 | NA | non-coding | upstream | 123811 | 46863411 ~ 46868689 (+) |
| G1299077 | NA | non-coding | upstream | 268442 | 46723785 ~ 46724058 (+) |
| G1299042 | NA | non-coding | upstream | 292037 | 46700237 ~ 46700463 (+) |
| G1299023 | NA | non-coding | upstream | 306111 | 46686160 ~ 46686389 (+) |
| G1299626 | NA | non-coding | downstream | 141034 | 47134977 ~ 47135571 (+) |
| G1299666 | NA | non-coding | downstream | 203437 | 47197380 ~ 47197611 (+) |
| G1299679 | NA | non-coding | downstream | 219848 | 47213791 ~ 47214027 (+) |
| G1299682 | NA | non-coding | downstream | 221745 | 47215688 ~ 47215891 (+) |
| G1299683 | NA | non-coding | downstream | 222816 | 47216759 ~ 47217073 (+) |
| G1298452 | NA | other | upstream | 732063 | 46254339 ~ 46260437 (+) |
| G1296185 | NA | other | upstream | 2340421 | 44649701 ~ 44652079 (+) |
| G1296266 | LOC106602826 | other | upstream | 2411452 | 44547179 ~ 44581048 (+) |
| cblb | cblb | other | upstream | 2666321 | 44173352 ~ 44326246 (+) |
| G1299894 | NA | other | downstream | 575887 | 47569830 ~ 47570663 (+) |
| G1300598 | LOC106575986 | other | downstream | 952425 | 47946368 ~ 47947892 (+) |
| kiss2 | kiss2 | other | downstream | 1365885 | 48359799 ~ 48360553 (+) |
| G1301200 | NA | other | downstream | 1590764 | 48584707 ~ 48585263 (+) |
| G1301458 | NA | other | downstream | 1936103 | 48930046 ~ 48930588 (+) |
