G1299626


Basic Information

Item Value
gene id G1299626
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 47134977 ~ 47135571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1482794
cttcttattattggtgtcctttaatagtggtttctttgcagcaattcgaccatgaaggcctgattcacccagtctcctctgaacagttgatgttgagatgagtctgttacttgaactctgaagcatttatttgggctgcaatctgaggcgcAGTTAATTgcccatttctgaggctggtaacgataatgaacttatcctctgcagcagaggtaactctgggtcttcctttcctgtggtgttccttatgagagccagtttcatcatagcacttgtttgtttttgcaactgcatttaatgaaactttcaaagttcttgaaattttccggagtgactgaccttcatgtcttaaagtaatgatggactgtcgtttctctttgcttatttgagctgttcttgacataatatggacttggtctcttACCACATAGGGCtaacttctgtataccaaccctaccttgtcacaacacaactgattggctcaaacacgttaataaggaaagacattccacaagttaacttttaacaaggcacacttgttaattgaaatgaatcccaggtgactacctcatgaagctggttgagagaatgccaagag

Function

NR:

description
hypothetical protein EH28_19535

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1482794 True 595 lncRNA 0.41 1 47134977 47135571
Loading

Neighbor

gene id symbol gene type direction distance location
brd1a LOC106575995 coding upstream 818902 46293582 ~ 46316075 (+)
alg12 alg12 coding upstream 866244 46260593 ~ 46268733 (+)
LOC110490155 pim3 coding upstream 962160 46168371 ~ 46172817 (+)
il17rel LOC106575998 coding upstream 1196172 45902083 ~ 45938805 (+)
LOC110490152 LOC106575950 coding upstream 1303888 45790639 ~ 45831089 (+)
cerk LOC106575992 coding downstream 276866 47412437 ~ 47443051 (+)
srr LOC106575990 coding downstream 583347 47717685 ~ 47723038 (+)
alg10 LOC106575988 coding downstream 597948 47733519 ~ 47736943 (+)
LOC110490177 NA coding downstream 863557 47999128 ~ 48001885 (+)
LOC110490734 LOC106576001 coding downstream 983203 48118774 ~ 48146269 (+)
G1299249 NA non-coding upstream 126651 46928642 ~ 47008326 (+)
G1299296 NA non-coding upstream 141034 46992500 ~ 46993943 (+)
G1299145 NA non-coding upstream 241277 46764574 ~ 46893700 (+)
G1299211 NA non-coding upstream 266288 46863411 ~ 46868689 (+)
G1299077 NA non-coding upstream 410919 46723785 ~ 46724058 (+)
G1299666 NA non-coding downstream 61809 47197380 ~ 47197611 (+)
G1299679 NA non-coding downstream 78220 47213791 ~ 47214027 (+)
G1299682 NA non-coding downstream 80117 47215688 ~ 47215891 (+)
G1299683 NA non-coding downstream 81188 47216759 ~ 47217073 (+)
G1299684 NA non-coding downstream 82267 47217838 ~ 47221536 (+)
G1298452 NA other upstream 874540 46254339 ~ 46260437 (+)
G1296185 NA other upstream 2482898 44649701 ~ 44652079 (+)
G1296266 LOC106602826 other upstream 2553929 44547179 ~ 44581048 (+)
cblb cblb other upstream 2808798 44173352 ~ 44326246 (+)
G1299894 NA other downstream 434259 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 810797 47946368 ~ 47947892 (+)
kiss2 kiss2 other downstream 1224257 48359799 ~ 48360553 (+)
G1301200 NA other downstream 1449136 48584707 ~ 48585263 (+)
G1301458 NA other downstream 1794475 48930046 ~ 48930588 (+)

Expression

G1299626 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G1299626 Expression in each Bioproject

Bar chart with 21 bars.
G1299626 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network