Gene
RNA
| Item | Value |
|---|---|
| gene id | G1300021 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 47197158 ~ 47197438 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1483211 | True | 281 | lncRNA | 0.44 | 1 | 47197158 | 47197438 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tafa5a | fam19a5 | coding | downstream | 202058 | 46822067 ~ 46995100 (-) |
| LOC110490845 | NA | coding | downstream | 478050 | 46717990 ~ 46719108 (-) |
| zbed4 | LOC106575996 | coding | downstream | 921496 | 46268990 ~ 46275662 (-) |
| creld2 | LOC106575997 | coding | downstream | 936668 | 46254337 ~ 46260490 (-) |
| LOC110490153 | LOC106575999 | coding | downstream | 1307769 | 45828313 ~ 45889389 (-) |
| tbc1d22a | tbc1d22a | coding | upstream | 20094 | 47217532 ~ 47405004 (-) |
| gramd4a | LOC106575991 | coding | upstream | 295318 | 47492755 ~ 47559047 (-) |
| celsr1a | LOC106576003 | coding | upstream | 387236 | 47584674 ~ 47707520 (-) |
| trmu | trmu | coding | upstream | 512756 | 47710194 ~ 47719547 (-) |
| tprkb | tprkb | coding | upstream | 530561 | 47727999 ~ 47733441 (-) |
| G1299482 | NA | non-coding | downstream | 269367 | 46888233 ~ 46927791 (-) |
| G1299136 | NA | non-coding | downstream | 436810 | 46759996 ~ 46760348 (-) |
| G1299133 | NA | non-coding | downstream | 438154 | 46758750 ~ 46759004 (-) |
| G1299131 | NA | non-coding | downstream | 439341 | 46757587 ~ 46757817 (-) |
| G1300022 | NA | non-coding | upstream | 194 | 47197632 ~ 47197887 (-) |
| G1300028 | NA | non-coding | upstream | 6971 | 47204409 ~ 47204657 (-) |
| G1300039 | NA | non-coding | upstream | 24166 | 47221604 ~ 47221824 (-) |
| G1300160 | NA | non-coding | upstream | 229327 | 47426765 ~ 47426969 (-) |
| G1298541 | LOC106575995 | other | downstream | 899206 | 46295361 ~ 46297952 (-) |
| G1298177 | NA | other | downstream | 1207895 | 45956059 ~ 45989263 (-) |
| G1298047 | kdm5a | other | downstream | 1434773 | 45752061 ~ 45762385 (-) |
| G1297577 | NA | other | downstream | 1694046 | 45495755 ~ 45503112 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | other | upstream | 1638156 | 48822973 ~ 48839311 (-) |
| G1302602 | NA | other | upstream | 2466513 | 49663951 ~ 49664296 (-) |
| LOC110490244 | LOC106609225 | other | upstream | 3102026 | 50290050 ~ 50301082 (-) |
