G1299709


Basic Information

Item Value
gene id G1299709
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 47251292 ~ 47252962 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1482882
aggagggagaggaagggtaatgagggactaggagggagaggaagggtaatgagggactaggagggagaggaagggtaatgagggactaggagggagaggaagggtaataacggactaggagggagaggaagggtaatgagggactaggagggagaggaagggtaatgagggactaggagggagaggaagggtaatgagggactaggagggagaggaagggtaattACGGACtaggggggagaggaagggtaatgagggactaggagggagaggaggggtaatgagggactaggagggagaggaagggtaatgagggactaggagggagaggaagggtaatgagggactaggagggagaggaagggtaatgagggactaggagggagaggaagggtaatgagggactaggagggagaggaagggtaatgagggactaggagggagaggaagggtaataacggactaggagggagaggaagggtaataacgcactaggagggagaggaagggtaataACGCActaggagggaggaaaggagaactTGGAAACGTGTCTTATTAAGCTGAAGCAGCATCCATTGACCCAAAACTCTTCAGAGCGTGGTTGAGAGGTATTTTTCAACAGAAGAGAAGATGCATGCAGGGGAAGACAAGAGAAGATACCTCAGTCAATAAGAGAaacggagagaagagaggaactaGGGGGCAGGGCCCAAAGTCTGATTCCTGCTTCATGCCAATGTCACCTTGCAGCAGCTGCTGCTGTCATCCCACTAATGCAGCCAATATGACCCCTGATCCCTGTAGTTAATGATGAGCGCAGTGCTGGGCTGGGATGTGCTGGAGAGAAGATCACACTGGCTGGCACACTCTGCTCAGCCCTACTGGGACTCACATTCATACTTAGTGGAAcagtctcaaatgacaccctattccctgtataaaCAATGCACTCCTTTTAAACTGCACCCTTTGTGGCCAAATGACCAAAGTCCAAATGACAGCCTTTCTTAAATAGAGCAACATGGGGATAGAGTCAGAGACCTCACTCTTCCAAATAAAAAGCAGTGGAAACATCACTATTAAAAAGGGGGTCTTTTTCTCACCCAGGACCTCAGTAAAAGGTGATGTAGGTACGACACCATAcatttccatccttctctcttaCCTGGAAATCTCTCTGGTCCAGAATCTCTTTCCTCCATCGTACTAGGAAAGCAGCACACACGTAGAGATGGAAGTGAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1482882 True 1246 lncRNA 0.50 2 47251292 47252962

Neighbor

gene id symbol gene type direction distance location
brd1a LOC106575995 coding upstream 935217 46293582 ~ 46316075 (+)
alg12 alg12 coding upstream 982559 46260593 ~ 46268733 (+)
LOC110490155 pim3 coding upstream 1078475 46168371 ~ 46172817 (+)
il17rel LOC106575998 coding upstream 1312487 45902083 ~ 45938805 (+)
LOC110490152 LOC106575950 coding upstream 1420203 45790639 ~ 45831089 (+)
cerk LOC106575992 coding downstream 159475 47412437 ~ 47443051 (+)
srr LOC106575990 coding downstream 465956 47717685 ~ 47723038 (+)
alg10 LOC106575988 coding downstream 480557 47733519 ~ 47736943 (+)
LOC110490177 NA coding downstream 746166 47999128 ~ 48001885 (+)
LOC110490734 LOC106576001 coding downstream 865812 48118774 ~ 48146269 (+)
G1299688 NA non-coding upstream 22238 47228733 ~ 47229054 (+)
G1299686 NA non-coding upstream 26272 47224802 ~ 47225020 (+)
G1299684 NA non-coding upstream 29756 47217838 ~ 47221536 (+)
G1299683 NA non-coding upstream 34219 47216759 ~ 47217073 (+)
G1299682 NA non-coding upstream 35401 47215688 ~ 47215891 (+)
G1299737 NA non-coding downstream 48487 47301449 ~ 47302624 (+)
G1299769 NA non-coding downstream 94423 47347385 ~ 47347685 (+)
G1299821 NA non-coding downstream 171406 47424368 ~ 47424589 (+)
G1299822 NA non-coding downstream 172685 47425647 ~ 47425858 (+)
G1299825 NA non-coding downstream 176651 47429613 ~ 47437555 (+)
G1298452 NA other upstream 990855 46254339 ~ 46260437 (+)
G1296185 NA other upstream 2599213 44649701 ~ 44652079 (+)
G1296266 LOC106602826 other upstream 2670244 44547179 ~ 44581048 (+)
cblb cblb other upstream 2925113 44173352 ~ 44326246 (+)
G1299894 NA other downstream 316868 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 693406 47946368 ~ 47947892 (+)
kiss2 kiss2 other downstream 1106866 48359799 ~ 48360553 (+)
G1301200 NA other downstream 1331745 48584707 ~ 48585263 (+)
G1301458 NA other downstream 1677084 48930046 ~ 48930588 (+)

Expression


Co-expression Network