G1299769


Basic Information

Item Value
gene id G1299769
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 47347385 ~ 47347685 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1482946
aagaagtggacagaggaagaggagggtggacGAAGAGGGAGGACGAGGGACTCACTGATGTACTCAAAGACGTAGACAACGAAGAAAGGCGTGACGAGGTCGTTGATGCCCTGCACGTAGCCGCTGGCCGGGTGGCGGATCGCCCAGATGAACAGGATACGCTCAAAGATCTGACGGACAGACGGAGGAACacagtcagcacacacacacactgtgtatagaGCACAGTACATAGAGGAACATGGAGGCTACTTCTAGAATCATTATGCACAAGCTTTTGTTTAAAGAGTATTTGTAAATT

Function

NR:

description
PREDICTED: ceramide kinase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1482946 True 301 lncRNA 0.50 1 47347385 47347685

Neighbor

gene id symbol gene type direction distance location
brd1a LOC106575995 coding upstream 1031310 46293582 ~ 46316075 (+)
alg12 alg12 coding upstream 1078652 46260593 ~ 46268733 (+)
LOC110490155 pim3 coding upstream 1174568 46168371 ~ 46172817 (+)
il17rel LOC106575998 coding upstream 1408580 45902083 ~ 45938805 (+)
LOC110490152 LOC106575950 coding upstream 1516296 45790639 ~ 45831089 (+)
cerk LOC106575992 coding downstream 64752 47412437 ~ 47443051 (+)
srr LOC106575990 coding downstream 371233 47717685 ~ 47723038 (+)
alg10 LOC106575988 coding downstream 385834 47733519 ~ 47736943 (+)
LOC110490177 NA coding downstream 651443 47999128 ~ 48001885 (+)
LOC110490734 LOC106576001 coding downstream 771089 48118774 ~ 48146269 (+)
G1299737 NA non-coding upstream 44761 47301449 ~ 47302624 (+)
G1299709 NA non-coding upstream 94423 47251292 ~ 47252962 (+)
G1299688 NA non-coding upstream 118331 47228733 ~ 47229054 (+)
G1299686 NA non-coding upstream 122365 47224802 ~ 47225020 (+)
G1299684 NA non-coding upstream 125849 47217838 ~ 47221536 (+)
G1299821 NA non-coding downstream 76683 47424368 ~ 47424589 (+)
G1299822 NA non-coding downstream 77962 47425647 ~ 47425858 (+)
G1299825 NA non-coding downstream 81928 47429613 ~ 47437555 (+)
G1299840 NA non-coding downstream 145101 47492786 ~ 47495801 (+)
G1299893 NA non-coding downstream 220849 47568534 ~ 47568819 (+)
G1298452 NA other upstream 1086948 46254339 ~ 46260437 (+)
G1296185 NA other upstream 2695306 44649701 ~ 44652079 (+)
G1296266 LOC106602826 other upstream 2766337 44547179 ~ 44581048 (+)
cblb cblb other upstream 3021206 44173352 ~ 44326246 (+)
G1299894 NA other downstream 222145 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 598683 47946368 ~ 47947892 (+)
kiss2 kiss2 other downstream 1012143 48359799 ~ 48360553 (+)
G1301200 NA other downstream 1237022 48584707 ~ 48585263 (+)
G1301458 NA other downstream 1582361 48930046 ~ 48930588 (+)

Expression


Co-expression Network