Gene
RNA
| Item | Value |
|---|---|
| gene id | G1299821 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 47424368 ~ 47424589 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1482998 | True | 222 | lncRNA | 0.28 | 1 | 47424368 | 47424589 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| brd1a | LOC106575995 | coding | upstream | 1108293 | 46293582 ~ 46316075 (+) |
| alg12 | alg12 | coding | upstream | 1155635 | 46260593 ~ 46268733 (+) |
| LOC110490155 | pim3 | coding | upstream | 1251551 | 46168371 ~ 46172817 (+) |
| il17rel | LOC106575998 | coding | upstream | 1485563 | 45902083 ~ 45938805 (+) |
| LOC110490152 | LOC106575950 | coding | upstream | 1593279 | 45790639 ~ 45831089 (+) |
| srr | LOC106575990 | coding | downstream | 294329 | 47717685 ~ 47723038 (+) |
| alg10 | LOC106575988 | coding | downstream | 308930 | 47733519 ~ 47736943 (+) |
| LOC110490177 | NA | coding | downstream | 574539 | 47999128 ~ 48001885 (+) |
| LOC110490734 | LOC106576001 | coding | downstream | 694185 | 48118774 ~ 48146269 (+) |
| slco1d1 | LOC106575962 | coding | downstream | 722483 | 48147072 ~ 48161884 (+) |
| G1299769 | NA | non-coding | upstream | 76683 | 47347385 ~ 47347685 (+) |
| G1299737 | NA | non-coding | upstream | 121744 | 47301449 ~ 47302624 (+) |
| G1299709 | NA | non-coding | upstream | 171406 | 47251292 ~ 47252962 (+) |
| G1299688 | NA | non-coding | upstream | 195314 | 47228733 ~ 47229054 (+) |
| G1299686 | NA | non-coding | upstream | 199348 | 47224802 ~ 47225020 (+) |
| G1299822 | NA | non-coding | downstream | 1058 | 47425647 ~ 47425858 (+) |
| G1299825 | NA | non-coding | downstream | 5024 | 47429613 ~ 47437555 (+) |
| G1299840 | NA | non-coding | downstream | 68197 | 47492786 ~ 47495801 (+) |
| G1299893 | NA | non-coding | downstream | 143945 | 47568534 ~ 47568819 (+) |
| G1298452 | NA | other | upstream | 1163931 | 46254339 ~ 46260437 (+) |
| G1296185 | NA | other | upstream | 2772289 | 44649701 ~ 44652079 (+) |
| G1296266 | LOC106602826 | other | upstream | 2843320 | 44547179 ~ 44581048 (+) |
| cblb | cblb | other | upstream | 3098189 | 44173352 ~ 44326246 (+) |
| G1299894 | NA | other | downstream | 145241 | 47569830 ~ 47570663 (+) |
| G1300598 | LOC106575986 | other | downstream | 521779 | 47946368 ~ 47947892 (+) |
| kiss2 | kiss2 | other | downstream | 935239 | 48359799 ~ 48360553 (+) |
| G1301200 | NA | other | downstream | 1160118 | 48584707 ~ 48585263 (+) |
| G1301458 | NA | other | downstream | 1505457 | 48930046 ~ 48930588 (+) |
