Gene
RNA
| Item | Value |
|---|---|
| gene id | G1300384 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 47822439 ~ 47823290 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1483621 | False | 365 | lncRNA | 0.45 | 3 | 47822439 | 47823290 |
| TU1483622 | True | 436 | lncRNA | 0.46 | 4 | 47822439 | 47823290 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| alg10 | LOC106575988 | coding | upstream | 85496 | 47733519 ~ 47736943 (+) |
| srr | LOC106575990 | coding | upstream | 99401 | 47717685 ~ 47723038 (+) |
| cerk | LOC106575992 | coding | upstream | 379388 | 47412437 ~ 47443051 (+) |
| brd1a | LOC106575995 | coding | upstream | 1506364 | 46293582 ~ 46316075 (+) |
| alg12 | alg12 | coding | upstream | 1553706 | 46260593 ~ 46268733 (+) |
| LOC110490177 | NA | coding | downstream | 175838 | 47999128 ~ 48001885 (+) |
| LOC110490734 | LOC106576001 | coding | downstream | 295484 | 48118774 ~ 48146269 (+) |
| slco1d1 | LOC106575962 | coding | downstream | 323782 | 48147072 ~ 48161884 (+) |
| LOC118938805 | NA | coding | downstream | 352154 | 48175444 ~ 48179144 (+) |
| LOC110490846 | LOC106576099 | coding | downstream | 441191 | 48264481 ~ 48267175 (+) |
| G1300373 | NA | non-coding | upstream | 17227 | 47804051 ~ 47805212 (+) |
| G1300367 | NA | non-coding | upstream | 30272 | 47791860 ~ 47792167 (+) |
| G1300363 | NA | non-coding | upstream | 35248 | 47786985 ~ 47787191 (+) |
| G1300348 | NA | non-coding | upstream | 59956 | 47762269 ~ 47762483 (+) |
| G1300346 | NA | non-coding | upstream | 64045 | 47758084 ~ 47758394 (+) |
| G1300410 | NA | non-coding | downstream | 24865 | 47848155 ~ 47867289 (+) |
| G1300580 | NA | non-coding | downstream | 107835 | 47931125 ~ 47931350 (+) |
| G1300583 | NA | non-coding | downstream | 109137 | 47932427 ~ 47932677 (+) |
| G1300585 | NA | non-coding | downstream | 110096 | 47933386 ~ 47934796 (+) |
| G1300615 | NA | non-coding | downstream | 152357 | 47975647 ~ 47979287 (+) |
| G1299894 | NA | other | upstream | 251776 | 47569830 ~ 47570663 (+) |
| G1298452 | NA | other | upstream | 1562002 | 46254339 ~ 46260437 (+) |
| G1296185 | NA | other | upstream | 3170360 | 44649701 ~ 44652079 (+) |
| G1296266 | LOC106602826 | other | upstream | 3241391 | 44547179 ~ 44581048 (+) |
| G1300598 | LOC106575986 | other | downstream | 123078 | 47946368 ~ 47947892 (+) |
| kiss2 | kiss2 | other | downstream | 536538 | 48359799 ~ 48360553 (+) |
| G1301200 | NA | other | downstream | 761417 | 48584707 ~ 48585263 (+) |
| G1301458 | NA | other | downstream | 1106756 | 48930046 ~ 48930588 (+) |
| G1301706 | NA | other | downstream | 1571933 | 49395223 ~ 49396921 (+) |
