G1300585


Basic Information

Item Value
gene id G1300585
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 47933386 ~ 47934796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1483830
CCGCATCTGGCATTAGAATCACTAGAAAGTCGGAATTTGTGCACAAGATGTCCACGAGGAAGAgaaacagattcttatttacataAAGATGGGGTCATATAGCCTATGTCATCCCAATCTAGGGATCCTGGGCTAGTCCACACAGATTAGGTTGTGATTCTGTACTATCTCCAGTATAAGATTGACAGGCACTGATAATAACACACACCTCTAGAGTTTTGTTATATTCTGTTCCGCCCGTTCCTGAATCAGATTGGGGGAAGGGCGTACGTGGGCACAGGAAAACTAACTCGGATGTTTTTTATTACTAGGTATTAATGCACTGCAAATCCGTGGATACAACCAATAAACTGAGTTGATTTGAGATAGTGCATACGCCTGTGCACAGGTAACCTCCCTTTACTTGGGCTCTGAAACGATTGAAGAAGGCCATTGGATACAACAAGAAATGGAAGATCAGAACTTTGGAGGTTTCAAAGTCGCCGTGAAAACACATAAATGCAAACATTTTGACAGGCCATTTTGGTAGTTTGAGGTTTGAATGTACTTGCATGATGCAAAGAGAGTAAGACCACTgcagaggtactgtactgtgcaCAGGCAAGTAAATGGGAATGCATTGGCTAAAGATACTCATCACAGCCCGTTGACTATCACAGAAGAAGGTGTGTCATTTGGTCACACACACAATCTGCATTAAAAGCAACACTTGAATTGGGTTGAGCTGAACCTCCACAATCGCATTTGTAGTATGACGACAACACACCCACATTGAACTTTGTTTCTGTAGCAGAGATCAGCCACACCGTCCCACACCACTAGTTCACTGTGCTATTCCCCACTGAGACTCTATGAGTCTCCCATAGGGTTTGGCAGTAACAGCTGAAGTAAGACCAACCTCCATAGGGCCTTATTaaaagacacccccccccccccctcccctcctgacACAGAGAGATGATTACACGCTCTGTAGCAGAAGATTCCTCTACGATATGATAGGATACAGCTTGAGACAGAAACATGGGCATTACACTGGAGTTTCACAATTCTTCAAGTGAATTCCATGACTGTTGTGCTACTCTCCTCCAGCCTTGTTGACGGAATGTTTTACGTTGGTGAACTCAATGGGTCACTGGTGTGTCTGGGCTGGTCATCTGGCCTGTGGCCAGCTTGGAGGTCCTCCATCCATGGATCATTGTGCAGAGCAGCAGTAAGTAGATTGAGTAGTAGATCCAGCAGGCAGCAATAGATCCCTAGGGCTGTAGTAGATCCAGAGTGATCTAGTAGATCCACAGCACTGTGTCCAGTCACAGTCCAGAGGTCTCCTTCTCAGTGTCAATGGATGCCTTCCTCCAAAGAACCCTTTGCTTGCCAAATCTTCACCGTCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1483830 True 1391 lncRNA 0.46 2 47933386 47934796

Neighbor

gene id symbol gene type direction distance location
alg10 LOC106575988 coding upstream 196443 47733519 ~ 47736943 (+)
srr LOC106575990 coding upstream 210348 47717685 ~ 47723038 (+)
cerk LOC106575992 coding upstream 490335 47412437 ~ 47443051 (+)
brd1a LOC106575995 coding upstream 1617311 46293582 ~ 46316075 (+)
alg12 alg12 coding upstream 1664653 46260593 ~ 46268733 (+)
LOC110490177 NA coding downstream 64332 47999128 ~ 48001885 (+)
LOC110490734 LOC106576001 coding downstream 183978 48118774 ~ 48146269 (+)
slco1d1 LOC106575962 coding downstream 212276 48147072 ~ 48161884 (+)
LOC118938805 NA coding downstream 240648 48175444 ~ 48179144 (+)
LOC110490846 LOC106576099 coding downstream 329685 48264481 ~ 48267175 (+)
G1300583 NA non-coding upstream 709 47932427 ~ 47932677 (+)
G1300580 NA non-coding upstream 2036 47931125 ~ 47931350 (+)
G1300410 NA non-coding upstream 66097 47848155 ~ 47867289 (+)
G1300384 NA non-coding upstream 110096 47822439 ~ 47823290 (+)
G1300373 NA non-coding upstream 128174 47804051 ~ 47805212 (+)
G1300615 NA non-coding downstream 40851 47975647 ~ 47979287 (+)
G1300629 NA non-coding downstream 61916 47996712 ~ 47997088 (+)
G1300695 NA non-coding downstream 175291 48110087 ~ 48110338 (+)
G1300711 NA non-coding downstream 246678 48181474 ~ 48212419 (+)
G1300714 NA non-coding downstream 248209 48183005 ~ 48225469 (+)
G1299894 NA other upstream 362723 47569830 ~ 47570663 (+)
G1298452 NA other upstream 1672949 46254339 ~ 46260437 (+)
G1296185 NA other upstream 3281307 44649701 ~ 44652079 (+)
G1296266 LOC106602826 other upstream 3352338 44547179 ~ 44581048 (+)
G1300598 LOC106575986 other downstream 11572 47946368 ~ 47947892 (+)
kiss2 kiss2 other downstream 425032 48359799 ~ 48360553 (+)
G1301200 NA other downstream 649911 48584707 ~ 48585263 (+)
G1301458 NA other downstream 995250 48930046 ~ 48930588 (+)
G1301706 NA other downstream 1460427 49395223 ~ 49396921 (+)

Expression


Co-expression Network