Gene
RNA
| Item | Value |
|---|---|
| gene id | G1300774 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 47963787 ~ 47988647 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1484066 | True | 356 | lncRNA | 0.43 | 2 | 47963787 | 47988647 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490170 | LOC106575987 | coding | downstream | 41412 | 47805327 ~ 47922375 (-) |
| tprkb | tprkb | coding | downstream | 230346 | 47727999 ~ 47733441 (-) |
| trmu | trmu | coding | downstream | 244240 | 47710194 ~ 47719547 (-) |
| celsr1a | LOC106576003 | coding | downstream | 256267 | 47584674 ~ 47707520 (-) |
| gramd4a | LOC106575991 | coding | downstream | 404740 | 47492755 ~ 47559047 (-) |
| LOC110490175 | LOC106575984 | coding | upstream | 13231 | 48001878 ~ 48103308 (-) |
| LOC118938803 | NA | coding | upstream | 153518 | 48142165 ~ 48148218 (-) |
| LOC118938804 | NA | coding | upstream | 190631 | 48179278 ~ 48180941 (-) |
| LOC118938806 | LOC106568775 | coding | upstream | 203920 | 48192567 ~ 48193854 (-) |
| LOC118938807 | LOC106590944 | coding | upstream | 209796 | 48198443 ~ 48198934 (-) |
| G1300481 | NA | non-coding | downstream | 158535 | 47804201 ~ 47805252 (-) |
| G1300479 | NA | non-coding | downstream | 159829 | 47800829 ~ 47803958 (-) |
| G1300527 | NA | non-coding | downstream | 163568 | 47799939 ~ 47800219 (-) |
| G1300526 | NA | non-coding | downstream | 164595 | 47798939 ~ 47799192 (-) |
| G1300525 | NA | non-coding | downstream | 164937 | 47798310 ~ 47798850 (-) |
| G1300791 | NA | non-coding | upstream | 8444 | 47997091 ~ 47997312 (-) |
| G1300792 | NA | non-coding | upstream | 8975 | 47997622 ~ 47997959 (-) |
| G1300793 | NA | non-coding | upstream | 9469 | 47998116 ~ 47998660 (-) |
| G1300794 | NA | non-coding | upstream | 10078 | 47998725 ~ 47999011 (-) |
| G1300766 | NA | non-coding | upstream | 10525 | 47999172 ~ 48000083 (-) |
| tbc1d22a | tbc1d22a | other | downstream | 744172 | 47217532 ~ 47405004 (-) |
| tafa5a | fam19a5 | other | downstream | 1010363 | 46822067 ~ 46995100 (-) |
| G1298541 | LOC106575995 | other | downstream | 1665835 | 46295361 ~ 46297952 (-) |
| G1298177 | NA | other | downstream | 1974524 | 45956059 ~ 45989263 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | other | upstream | 846947 | 48822973 ~ 48839311 (-) |
| G1302602 | NA | other | upstream | 1675304 | 49663951 ~ 49664296 (-) |
| LOC110490244 | LOC106609225 | other | upstream | 2310817 | 50290050 ~ 50301082 (-) |
| LOC110490264 | LOC106576080 | other | upstream | 3210582 | 51199223 ~ 51205927 (-) |
| LOC110490744 | LOC106576129 | other | upstream | 3797984 | 51785488 ~ 51793354 (-) |
