Gene
RNA
| Item | Value |
|---|---|
| gene id | G1300850 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 48108085 ~ 48108301 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1484146 | True | 217 | lncRNA | 0.47 | 1 | 48108085 | 48108301 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490175 | LOC106575984 | coding | downstream | 4777 | 48001878 ~ 48103308 (-) |
| LOC110490173 | LOC106575983 | coding | downstream | 111781 | 47975615 ~ 47996304 (-) |
| LOC110490171 | NA | coding | downstream | 133012 | 47933355 ~ 47975073 (-) |
| LOC110490170 | LOC106575987 | coding | downstream | 185710 | 47805327 ~ 47922375 (-) |
| tprkb | tprkb | coding | downstream | 374644 | 47727999 ~ 47733441 (-) |
| LOC118938803 | NA | coding | upstream | 33864 | 48142165 ~ 48148218 (-) |
| LOC118938804 | NA | coding | upstream | 70977 | 48179278 ~ 48180941 (-) |
| LOC118938806 | LOC106568775 | coding | upstream | 84266 | 48192567 ~ 48193854 (-) |
| LOC118938807 | LOC106590944 | coding | upstream | 90142 | 48198443 ~ 48198934 (-) |
| LOC118938808 | NA | coding | upstream | 91917 | 48200218 ~ 48201214 (-) |
| G1300814 | NA | non-coding | downstream | 63178 | 48042623 ~ 48044907 (-) |
| G1300766 | NA | non-coding | downstream | 108002 | 47999172 ~ 48000083 (-) |
| G1300794 | NA | non-coding | downstream | 109074 | 47998725 ~ 47999011 (-) |
| G1300793 | NA | non-coding | downstream | 109425 | 47998116 ~ 47998660 (-) |
| G1300792 | NA | non-coding | downstream | 110126 | 47997622 ~ 47997959 (-) |
| G1300858 | NA | non-coding | upstream | 10495 | 48118796 ~ 48120147 (-) |
| G1300860 | LOC106591259 | non-coding | upstream | 12701 | 48121002 ~ 48122073 (-) |
| G1300816 | NA | non-coding | upstream | 45665 | 48153966 ~ 48161890 (-) |
| G1300893 | NA | non-coding | upstream | 76071 | 48184372 ~ 48215172 (-) |
| celsr1a | LOC106576003 | other | downstream | 404047 | 47584674 ~ 47707520 (-) |
| tbc1d22a | tbc1d22a | other | downstream | 888470 | 47217532 ~ 47405004 (-) |
| tafa5a | fam19a5 | other | downstream | 1154661 | 46822067 ~ 46995100 (-) |
| G1298541 | LOC106575995 | other | downstream | 1810133 | 46295361 ~ 46297952 (-) |
| G1298177 | NA | other | downstream | 2118822 | 45956059 ~ 45989263 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | other | upstream | 727293 | 48822973 ~ 48839311 (-) |
| G1302602 | NA | other | upstream | 1555650 | 49663951 ~ 49664296 (-) |
| LOC110490244 | LOC106609225 | other | upstream | 2191163 | 50290050 ~ 50301082 (-) |
| LOC110490264 | LOC106576080 | other | upstream | 3090928 | 51199223 ~ 51205927 (-) |
| LOC110490744 | LOC106576129 | other | upstream | 3678330 | 51785488 ~ 51793354 (-) |
