G1300695


Basic Information

Item Value
gene id G1300695
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48110087 ~ 48110338 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1483947
actgtcataccccgttcaaaggcacttaaatatgtttTCTTGCCTGTTCTTTCTCTGAATTGCACACACacccaatccatgtctcaattgtctcaaggtttaaaaatccttctttaacctgcctcctccccttcatctacactgatttaaagtggatttaacaagtgacatcaataagggatcatagctttcacctggtttcacctggtcaggctatgtcatggaaagagcaggtgttcctaatgttttgta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1483947 True 252 lncRNA 0.40 1 48110087 48110338

Neighbor

gene id symbol gene type direction distance location
LOC110490177 NA coding upstream 108202 47999128 ~ 48001885 (+)
alg10 LOC106575988 coding upstream 373144 47733519 ~ 47736943 (+)
srr LOC106575990 coding upstream 387049 47717685 ~ 47723038 (+)
cerk LOC106575992 coding upstream 667036 47412437 ~ 47443051 (+)
brd1a LOC106575995 coding upstream 1794012 46293582 ~ 46316075 (+)
LOC110490734 LOC106576001 coding downstream 8436 48118774 ~ 48146269 (+)
slco1d1 LOC106575962 coding downstream 36734 48147072 ~ 48161884 (+)
LOC118938805 NA coding downstream 65106 48175444 ~ 48179144 (+)
LOC110490846 LOC106576099 coding downstream 154143 48264481 ~ 48267175 (+)
pyroxd1 pyroxd1 coding downstream 190264 48300602 ~ 48308741 (+)
G1300629 NA non-coding upstream 112999 47996712 ~ 47997088 (+)
G1300615 NA non-coding upstream 130800 47975647 ~ 47979287 (+)
G1300585 NA non-coding upstream 175291 47933386 ~ 47934796 (+)
G1300583 NA non-coding upstream 177410 47932427 ~ 47932677 (+)
G1300580 NA non-coding upstream 178737 47931125 ~ 47931350 (+)
G1300711 NA non-coding downstream 71136 48181474 ~ 48212419 (+)
G1300714 NA non-coding downstream 72667 48183005 ~ 48225469 (+)
G1300736 NA non-coding downstream 79661 48189999 ~ 48216406 (+)
G1300734 NA non-coding downstream 80138 48190476 ~ 48220807 (+)
G1300748 NA non-coding downstream 109372 48219710 ~ 48221403 (+)
G1300598 LOC106575986 other upstream 162195 47946368 ~ 47947892 (+)
G1299894 NA other upstream 539424 47569830 ~ 47570663 (+)
G1298452 NA other upstream 1849650 46254339 ~ 46260437 (+)
G1296185 NA other upstream 3458008 44649701 ~ 44652079 (+)
kiss2 kiss2 other downstream 249490 48359799 ~ 48360553 (+)
G1301200 NA other downstream 474369 48584707 ~ 48585263 (+)
G1301458 NA other downstream 819708 48930046 ~ 48930588 (+)
G1301706 NA other downstream 1284885 49395223 ~ 49396921 (+)
LOC110490228 NA other downstream 1288120 49398275 ~ 49410313 (+)

Expression


Co-expression Network