G1300734



Basic Information


Item Value
gene id G1300734
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48190476 ~ 48220807 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1484007
tgatttgatcttcctTGCCCTCATCACATGTCTCGGTGGCTCCTCCTACTTTTTCATCATCGCAGTCATTACAGTTTAGGAGGGAGGGGGACACCCCCACAGGACAGCCCCCACACTCATTGCTAGAGATGGAACTTCAGACTCTCCCCAAAACAACTGAACCCCCCAACAAACCGAAAGAGATTTAAGGTGCACACCCCTAAAGAGGTAGCCAGAACAGGATAACTCCCTTCaagctcacaaagacacagtggaggaggaactatccgacacccagggagagagaacgagtgaCCTCAGTCGAACACAGacagcagggagaggaggaggttacCCCAGATGCCATTCCTCCTGCTCATGTGAGCAAGGAAAGAGATGACAAGCCTTCCGATCAGGCCAACAGGCAGGCCAagggagaggtcatagtgattcacacccacagagagaaagacaacccacacaacctaTTGGCTGAGATGAACCACACAGAGTTAGAGGCAGAGGGCTTTCAGGGCTAGCCAGTCAAACagcctgctctgatcctcaagtcagTTGTAtttaaattcatgttcattaaagatttttattcaagatTTGAAAAGTCCCATTTACTTAATGATATATTTTCACTGTCTGCAACCCTCAAGAACCAGGGTGAGTCTGGGTCACCCTTTTCCTGGgcaaacacaacttgcatatcGTCATAG

Function


NR:

description
PREDICTED: solute carrier organic anion transporter family member 1C1-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1484007 True 707 lncRNA 0.48 2 48190476 48220807

Neighbor


gene id symbol gene type direction distance location
LOC118938805 NA coding upstream 11332 48175444 ~ 48179144 (+)
slco1d1 LOC106575962 coding upstream 28592 48147072 ~ 48161884 (+)
LOC110490734 LOC106576001 coding upstream 44207 48118774 ~ 48146269 (+)
LOC110490177 NA coding upstream 188591 47999128 ~ 48001885 (+)
alg10 LOC106575988 coding upstream 453533 47733519 ~ 47736943 (+)
LOC110490846 LOC106576099 coding downstream 43674 48264481 ~ 48267175 (+)
pyroxd1 pyroxd1 coding downstream 79795 48300602 ~ 48308741 (+)
LOC110490186 LOC106576018 coding downstream 107990 48328797 ~ 48332219 (+)
LOC110490188 LOC106566434 coding downstream 115324 48336131 ~ 48337866 (+)
kiss2 kiss2 coding downstream 138992 48359799 ~ 48360553 (+)
G1300695 NA non-coding upstream 80138 48110087 ~ 48110338 (+)
G1300629 NA non-coding upstream 193388 47996712 ~ 47997088 (+)
G1300615 NA non-coding upstream 211189 47975647 ~ 47979287 (+)
G1300585 NA non-coding upstream 255680 47933386 ~ 47934796 (+)
G1300583 NA non-coding upstream 257799 47932427 ~ 47932677 (+)
G1300750 LOC106568775 non-coding downstream 1348 48222155 ~ 48229284 (+)
G1300712 NA non-coding downstream 1789 48222596 ~ 48230909 (+)
G1300752 NA non-coding downstream 6329 48227136 ~ 48256446 (+)
G1300754 NA non-coding downstream 8906 48229713 ~ 48241799 (+)
G1300730 NA non-coding downstream 28449 48249256 ~ 48250110 (+)
G1300598 LOC106575986 other upstream 242584 47946368 ~ 47947892 (+)
G1299894 NA other upstream 619813 47569830 ~ 47570663 (+)
brd1a LOC106575995 other upstream 1874474 46293582 ~ 46316075 (+)
G1298452 NA other upstream 1930039 46254339 ~ 46260437 (+)
G1296185 NA other upstream 3538397 44649701 ~ 44652079 (+)
G1301200 NA other downstream 363900 48584707 ~ 48585263 (+)
G1301458 NA other downstream 709239 48930046 ~ 48930588 (+)
G1301706 NA other downstream 1174416 49395223 ~ 49396921 (+)
LOC110490228 NA other downstream 1177651 49398275 ~ 49410313 (+)

Expression



Co-expression Network