G1300752


Basic Information

Item Value
gene id G1300752
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48227136 ~ 48256446 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1484034
gtcatagtgattcacacccacagagagaaagacaacccacacaacctcttggcTGAGATGAACCACACAGAGgtagaggcagagggccttcagggctagccagtcagcctgcctgctctgatcctcaagtcagTTGTAtttaaattcatgttcattaaagatttttattcaagatTTGAAAAGTCCCATTTACTTAATGATATCTTTTCACTGTCTGCAACCCTCAAGAACCAGGGTGAGTCTGGGTCACCCTTTTCCTGGgcaaacacaacttgcatatTGTCATAGATTAGGTCAAAATGTTCATCTTTTAACCTTGCttgaataaaacaatgcattttttatagtgcGCAAGAGTTGCGctttttccttttctatgatgattaaaggttttggttgcacctcaactcAACGTTGGTTGAGCTCCctcc

Function

NR:

description
PREDICTED: solute carrier organic anion transporter family member 1C1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1484034 True 431 lncRNA 0.42 3 48227136 48256446

Neighbor

gene id symbol gene type direction distance location
LOC118938805 NA coding upstream 47992 48175444 ~ 48179144 (+)
slco1d1 LOC106575962 coding upstream 65252 48147072 ~ 48161884 (+)
LOC110490734 LOC106576001 coding upstream 80867 48118774 ~ 48146269 (+)
LOC110490177 NA coding upstream 225251 47999128 ~ 48001885 (+)
alg10 LOC106575988 coding upstream 490193 47733519 ~ 47736943 (+)
LOC110490846 LOC106576099 coding downstream 8035 48264481 ~ 48267175 (+)
pyroxd1 pyroxd1 coding downstream 44156 48300602 ~ 48308741 (+)
LOC110490186 LOC106576018 coding downstream 72351 48328797 ~ 48332219 (+)
LOC110490188 LOC106566434 coding downstream 79685 48336131 ~ 48337866 (+)
kiss2 kiss2 coding downstream 103353 48359799 ~ 48360553 (+)
G1300714 NA non-coding upstream 1667 48183005 ~ 48225469 (+)
G1300748 NA non-coding upstream 5733 48219710 ~ 48221403 (+)
G1300734 NA non-coding upstream 6329 48190476 ~ 48220807 (+)
G1300736 NA non-coding upstream 10730 48189999 ~ 48216406 (+)
G1300711 NA non-coding upstream 14717 48181474 ~ 48212419 (+)
G1300923 NA non-coding downstream 13500 48269946 ~ 48270171 (+)
G1300931 NA non-coding downstream 16748 48273194 ~ 48273489 (+)
G1300957 LOC106566433 non-coding downstream 88373 48344819 ~ 48349516 (+)
G1300967 NA non-coding downstream 104269 48360715 ~ 48360941 (+)
G1300953 ldhb non-coding downstream 106291 48362737 ~ 48367701 (+)
G1300598 LOC106575986 other upstream 279244 47946368 ~ 47947892 (+)
G1299894 NA other upstream 656473 47569830 ~ 47570663 (+)
brd1a LOC106575995 other upstream 1911134 46293582 ~ 46316075 (+)
G1298452 NA other upstream 1966699 46254339 ~ 46260437 (+)
G1296185 NA other upstream 3575057 44649701 ~ 44652079 (+)
G1301200 NA other downstream 328261 48584707 ~ 48585263 (+)
G1301458 NA other downstream 673600 48930046 ~ 48930588 (+)
G1301706 NA other downstream 1138777 49395223 ~ 49396921 (+)
LOC110490228 NA other downstream 1142012 49398275 ~ 49410313 (+)

Expression


Co-expression Network