G1300931


Basic Information

Item Value
gene id G1300931
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48273194 ~ 48273489 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1484264
taccttaagggaacatttcggcatttcgtgtatgatcagtgagaaagtccatattgcaaatgtacggtcccttacccgacgtccgaaatcgtttgtaaaattcgcggtcggcgtcgggccgtgcggtagggccagacctaccgggaagtcatcgaatgaactttgtcggactttcggtttccgtttaaaaaaaaaaacaagtttcggaccgtttttccgccgtcccggacactcccaccagatggcatacggaatcatatggcaatttggcaaaacatcacgaatcgcgacggggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1484264 True 296 lncRNA 0.50 1 48273194 48273489

Neighbor

gene id symbol gene type direction distance location
LOC110490846 LOC106576099 coding upstream 6019 48264481 ~ 48267175 (+)
LOC118938805 NA coding upstream 94050 48175444 ~ 48179144 (+)
slco1d1 LOC106575962 coding upstream 111310 48147072 ~ 48161884 (+)
LOC110490734 LOC106576001 coding upstream 126925 48118774 ~ 48146269 (+)
LOC110490177 NA coding upstream 271309 47999128 ~ 48001885 (+)
pyroxd1 pyroxd1 coding downstream 27113 48300602 ~ 48308741 (+)
LOC110490186 LOC106576018 coding downstream 55308 48328797 ~ 48332219 (+)
LOC110490188 LOC106566434 coding downstream 62642 48336131 ~ 48337866 (+)
kiss2 kiss2 coding downstream 86310 48359799 ~ 48360553 (+)
LOC110490738 LOC106576023 coding downstream 160269 48433758 ~ 48441874 (+)
G1300923 NA non-coding upstream 3023 48269946 ~ 48270171 (+)
G1300752 NA non-coding upstream 16748 48227136 ~ 48256446 (+)
G1300730 NA non-coding upstream 23084 48249256 ~ 48250110 (+)
G1300754 NA non-coding upstream 31395 48229713 ~ 48241799 (+)
G1300712 NA non-coding upstream 42285 48222596 ~ 48230909 (+)
G1300957 LOC106566433 non-coding downstream 71330 48344819 ~ 48349516 (+)
G1300967 NA non-coding downstream 87226 48360715 ~ 48360941 (+)
G1300953 ldhb non-coding downstream 89248 48362737 ~ 48367701 (+)
G1300972 NA non-coding downstream 105070 48378559 ~ 48378910 (+)
G1300973 NA non-coding downstream 106032 48379521 ~ 48379762 (+)
G1300598 LOC106575986 other upstream 325302 47946368 ~ 47947892 (+)
G1299894 NA other upstream 702531 47569830 ~ 47570663 (+)
brd1a LOC106575995 other upstream 1957192 46293582 ~ 46316075 (+)
G1298452 NA other upstream 2012757 46254339 ~ 46260437 (+)
G1296185 NA other upstream 3621115 44649701 ~ 44652079 (+)
G1301200 NA other downstream 311218 48584707 ~ 48585263 (+)
G1301458 NA other downstream 656557 48930046 ~ 48930588 (+)
G1301706 NA other downstream 1121734 49395223 ~ 49396921 (+)
LOC110490228 NA other downstream 1124969 49398275 ~ 49410313 (+)

Expression


Co-expression Network