Gene
RNA
| Item | Value |
|---|---|
| gene id | G1300953 |
| gene name | ldhb |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 48362737 ~ 48367701 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| ldhb | Enables L-lactate dehydrogenase activity and identical protein binding activity. Predicted to be involved in carbohydrate metabolic process and carboxylic acid metabolic process. Located in cytosol; membrane raft; and mitochondrial inner membrane. |
| description |
|---|
| PREDICTED: L-lactate dehydrogenase B chain |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1484288 | True | 3866 | lncRNA | 0.46 | 5 | 48362737 | 48367701 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| kiss2 | kiss2 | coding | upstream | 2184 | 48359799 ~ 48360553 (+) |
| LOC110490188 | LOC106566434 | coding | upstream | 24871 | 48336131 ~ 48337866 (+) |
| LOC110490186 | LOC106576018 | coding | upstream | 30518 | 48328797 ~ 48332219 (+) |
| pyroxd1 | pyroxd1 | coding | upstream | 53996 | 48300602 ~ 48308741 (+) |
| LOC110490846 | LOC106576099 | coding | upstream | 95562 | 48264481 ~ 48267175 (+) |
| LOC110490738 | LOC106576023 | coding | downstream | 66057 | 48433758 ~ 48441874 (+) |
| LOC110490194 | calu | coding | downstream | 102320 | 48470021 ~ 48479877 (+) |
| LOC110490196 | tnpo3 | coding | downstream | 124874 | 48492575 ~ 48509832 (+) |
| lamtor4 | LOC106576032 | coding | downstream | 382449 | 48750150 ~ 48752766 (+) |
| LOC110490204 | LOC106576029 | coding | downstream | 389504 | 48757205 ~ 48767893 (+) |
| G1300967 | NA | non-coding | upstream | 1796 | 48360715 ~ 48360941 (+) |
| G1300957 | LOC106566433 | non-coding | upstream | 13221 | 48344819 ~ 48349516 (+) |
| G1300931 | NA | non-coding | upstream | 89248 | 48273194 ~ 48273489 (+) |
| G1300923 | NA | non-coding | upstream | 92566 | 48269946 ~ 48270171 (+) |
| G1300730 | NA | non-coding | upstream | 112627 | 48249256 ~ 48250110 (+) |
| G1300972 | NA | non-coding | downstream | 10858 | 48378559 ~ 48378910 (+) |
| G1300973 | NA | non-coding | downstream | 11820 | 48379521 ~ 48379762 (+) |
| G1300979 | NA | non-coding | downstream | 14655 | 48382356 ~ 48382602 (+) |
| G1300981 | NA | non-coding | downstream | 16051 | 48383752 ~ 48384048 (+) |
| G1300983 | NA | non-coding | downstream | 17595 | 48385296 ~ 48385580 (+) |
| G1300598 | LOC106575986 | other | upstream | 414845 | 47946368 ~ 47947892 (+) |
| G1299894 | NA | other | upstream | 792074 | 47569830 ~ 47570663 (+) |
| brd1a | LOC106575995 | other | upstream | 2046735 | 46293582 ~ 46316075 (+) |
| G1298452 | NA | other | upstream | 2102300 | 46254339 ~ 46260437 (+) |
| G1301200 | NA | other | downstream | 217006 | 48584707 ~ 48585263 (+) |
| G1301458 | NA | other | downstream | 562345 | 48930046 ~ 48930588 (+) |
| G1301706 | NA | other | downstream | 1027522 | 49395223 ~ 49396921 (+) |
| LOC110490228 | NA | other | downstream | 1030757 | 49398275 ~ 49410313 (+) |
| G1303015 | NA | other | downstream | 1810573 | 50178274 ~ 50178565 (+) |
