Gene
RNA
| Item | Value |
|---|---|
| gene id | G1301162 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 48519355 ~ 48519624 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1484516 | True | 270 | lncRNA | 0.45 | 1 | 48519355 | 48519624 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490196 | tnpo3 | coding | upstream | 9523 | 48492575 ~ 48509832 (+) |
| LOC110490194 | calu | coding | upstream | 39478 | 48470021 ~ 48479877 (+) |
| LOC110490738 | LOC106576023 | coding | upstream | 77481 | 48433758 ~ 48441874 (+) |
| kiss2 | kiss2 | coding | upstream | 158802 | 48359799 ~ 48360553 (+) |
| LOC110490188 | LOC106566434 | coding | upstream | 181489 | 48336131 ~ 48337866 (+) |
| lamtor4 | LOC106576032 | coding | downstream | 230526 | 48750150 ~ 48752766 (+) |
| LOC110490204 | LOC106576029 | coding | downstream | 237581 | 48757205 ~ 48767893 (+) |
| LOC110490205 | LOC106576033 | coding | downstream | 255832 | 48775456 ~ 48783034 (+) |
| LOC110490215 | LOC106576040 | coding | downstream | 332955 | 48852579 ~ 48859532 (+) |
| LOC110490216 | LOC106609152 | coding | downstream | 435446 | 48955070 ~ 48957811 (+) |
| G1301144 | NA | non-coding | upstream | 28065 | 48491089 ~ 48491290 (+) |
| G1301140 | NA | non-coding | upstream | 30731 | 48488424 ~ 48488624 (+) |
| G1301014 | NA | non-coding | upstream | 52632 | 48466509 ~ 48466723 (+) |
| G1300990 | lap2 | non-coding | upstream | 119859 | 48398422 ~ 48399496 (+) |
| G1300983 | NA | non-coding | upstream | 133775 | 48385296 ~ 48385580 (+) |
| G1301164 | NA | non-coding | downstream | 1719 | 48521343 ~ 48521564 (+) |
| G1301167 | NA | non-coding | downstream | 4380 | 48524004 ~ 48524217 (+) |
| G1301169 | NA | non-coding | downstream | 7254 | 48526878 ~ 48527123 (+) |
| G1301173 | NA | non-coding | downstream | 10931 | 48530555 ~ 48530793 (+) |
| G1301178 | NA | non-coding | downstream | 18216 | 48537840 ~ 48538177 (+) |
| G1300598 | LOC106575986 | other | upstream | 571463 | 47946368 ~ 47947892 (+) |
| G1299894 | NA | other | upstream | 948692 | 47569830 ~ 47570663 (+) |
| brd1a | LOC106575995 | other | upstream | 2203353 | 46293582 ~ 46316075 (+) |
| G1298452 | NA | other | upstream | 2258918 | 46254339 ~ 46260437 (+) |
| G1301200 | NA | other | downstream | 65083 | 48584707 ~ 48585263 (+) |
| G1301458 | NA | other | downstream | 410422 | 48930046 ~ 48930588 (+) |
| G1301706 | NA | other | downstream | 875599 | 49395223 ~ 49396921 (+) |
| LOC110490228 | NA | other | downstream | 878834 | 49398275 ~ 49410313 (+) |
| G1303015 | NA | other | downstream | 1658650 | 50178274 ~ 50178565 (+) |
