G1301167


Basic Information

Item Value
gene id G1301167
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48524004 ~ 48524217 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1484521
aaacaagactgcactacaaggtggaattcaacattttatatgttgaagcggcttcttgagtcaaaggatgccatcatctctaccctggccattgtcaCAATGCACCTGCtgatgctctgacccaagaggaaagggaggtggtggaggaggtgtgcagagtcctggaaccctttgagcaggtcactgtggagatcagtggagagaggtacagtaa

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1484521 True 214 lncRNA 0.49 1 48524004 48524217

Neighbor

gene id symbol gene type direction distance location
LOC110490196 tnpo3 coding upstream 14172 48492575 ~ 48509832 (+)
LOC110490194 calu coding upstream 44127 48470021 ~ 48479877 (+)
LOC110490738 LOC106576023 coding upstream 82130 48433758 ~ 48441874 (+)
kiss2 kiss2 coding upstream 163451 48359799 ~ 48360553 (+)
LOC110490188 LOC106566434 coding upstream 186138 48336131 ~ 48337866 (+)
lamtor4 LOC106576032 coding downstream 225933 48750150 ~ 48752766 (+)
LOC110490204 LOC106576029 coding downstream 232988 48757205 ~ 48767893 (+)
LOC110490205 LOC106576033 coding downstream 251239 48775456 ~ 48783034 (+)
LOC110490215 LOC106576040 coding downstream 328362 48852579 ~ 48859532 (+)
LOC110490216 LOC106609152 coding downstream 430853 48955070 ~ 48957811 (+)
G1301164 NA non-coding upstream 2440 48521343 ~ 48521564 (+)
G1301162 NA non-coding upstream 4380 48519355 ~ 48519624 (+)
G1301144 NA non-coding upstream 32714 48491089 ~ 48491290 (+)
G1301140 NA non-coding upstream 35380 48488424 ~ 48488624 (+)
G1301014 NA non-coding upstream 57281 48466509 ~ 48466723 (+)
G1301169 NA non-coding downstream 2661 48526878 ~ 48527123 (+)
G1301173 NA non-coding downstream 6338 48530555 ~ 48530793 (+)
G1301178 NA non-coding downstream 13623 48537840 ~ 48538177 (+)
G1301182 NA non-coding downstream 17518 48541735 ~ 48542001 (+)
G1301256 NA non-coding downstream 70230 48594447 ~ 48594697 (+)
G1300598 LOC106575986 other upstream 576112 47946368 ~ 47947892 (+)
G1299894 NA other upstream 953341 47569830 ~ 47570663 (+)
brd1a LOC106575995 other upstream 2208002 46293582 ~ 46316075 (+)
G1298452 NA other upstream 2263567 46254339 ~ 46260437 (+)
G1301200 NA other downstream 60490 48584707 ~ 48585263 (+)
G1301458 NA other downstream 405829 48930046 ~ 48930588 (+)
G1301706 NA other downstream 871006 49395223 ~ 49396921 (+)
LOC110490228 NA other downstream 874241 49398275 ~ 49410313 (+)
G1303015 NA other downstream 1654057 50178274 ~ 50178565 (+)

Expression


Co-expression Network