G1301169


Basic Information

Item Value
gene id G1301169
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48526878 ~ 48527123 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1484523
gtttctataacttggttggagtccacctgtggtaaattcaattgattggacaggatttggaaaggcacacacctgtctatataaggtcccacagttgacagtgcatgtcgaaGCAAAAATTAAGGTTGAAGTAATTggccgtagagctcagagacatgattgtgtcgaggcacagatctggggaagggtaccaaaacatgtctgcagcattgaaggtccccaagaacacagtggcctccatgactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1484523 True 246 lncRNA 0.46 1 48526878 48527123

Neighbor

gene id symbol gene type direction distance location
LOC110490196 tnpo3 coding upstream 17046 48492575 ~ 48509832 (+)
LOC110490194 calu coding upstream 47001 48470021 ~ 48479877 (+)
LOC110490738 LOC106576023 coding upstream 85004 48433758 ~ 48441874 (+)
kiss2 kiss2 coding upstream 166325 48359799 ~ 48360553 (+)
LOC110490188 LOC106566434 coding upstream 189012 48336131 ~ 48337866 (+)
lamtor4 LOC106576032 coding downstream 223027 48750150 ~ 48752766 (+)
LOC110490204 LOC106576029 coding downstream 230082 48757205 ~ 48767893 (+)
LOC110490205 LOC106576033 coding downstream 248333 48775456 ~ 48783034 (+)
LOC110490215 LOC106576040 coding downstream 325456 48852579 ~ 48859532 (+)
LOC110490216 LOC106609152 coding downstream 427947 48955070 ~ 48957811 (+)
G1301167 NA non-coding upstream 2661 48524004 ~ 48524217 (+)
G1301164 NA non-coding upstream 5314 48521343 ~ 48521564 (+)
G1301162 NA non-coding upstream 7254 48519355 ~ 48519624 (+)
G1301144 NA non-coding upstream 35588 48491089 ~ 48491290 (+)
G1301140 NA non-coding upstream 38254 48488424 ~ 48488624 (+)
G1301173 NA non-coding downstream 3432 48530555 ~ 48530793 (+)
G1301178 NA non-coding downstream 10717 48537840 ~ 48538177 (+)
G1301182 NA non-coding downstream 14612 48541735 ~ 48542001 (+)
G1301256 NA non-coding downstream 67324 48594447 ~ 48594697 (+)
G1301272 NA non-coding downstream 75528 48602651 ~ 48603258 (+)
G1300598 LOC106575986 other upstream 578986 47946368 ~ 47947892 (+)
G1299894 NA other upstream 956215 47569830 ~ 47570663 (+)
brd1a LOC106575995 other upstream 2210876 46293582 ~ 46316075 (+)
G1298452 NA other upstream 2266441 46254339 ~ 46260437 (+)
G1301200 NA other downstream 57584 48584707 ~ 48585263 (+)
G1301458 NA other downstream 402923 48930046 ~ 48930588 (+)
G1301706 NA other downstream 868100 49395223 ~ 49396921 (+)
LOC110490228 NA other downstream 871335 49398275 ~ 49410313 (+)
G1303015 NA other downstream 1651151 50178274 ~ 50178565 (+)

Expression


Co-expression Network