G1301200


Basic Information

Item Value
gene id G1301200
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48584707 ~ 48585263 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1484559
atgggagtgggatccaggggccgctcctctgtatcatacagccgggacaatgcATCTGCCTTAGAGTTCTGAGAGCCTGGGCTGTATGAAAGGGTAAatacaaaacgggtgaaaaacatggcccgcCTTGCGAGGGTTCAGgctcctcgccgcccggatgtactgCAGATTacagtggtcagtccagatgagaaaaaggtttttagccccctcaagccaatgtctccacgccttcaaggccttgacgacagccaacagctcccggtcccttacatcatagtttcgctccgccgggctgagcttcttcgagaagaaggcacagaagcagagcttcggtggcgtacccgagcactGAGAAAGCACCGCTCCTATCctagcctcggacgcgtccacctccactatgaacgccaaagagggatctggatgggccagcacgggagccgaggtaaacagagcccttaggtgactaaaagccctgtccgcctcagctgaccactgcaagcgcactgggcccccctttagcagtgaggtaatgggagctgccacctgaccaaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1484559 True 557 TUCP 0.57 1 48584707 48585263

Neighbor

gene id symbol gene type direction distance location
LOC110490196 tnpo3 coding upstream 74875 48492575 ~ 48509832 (+)
LOC110490194 calu coding upstream 104830 48470021 ~ 48479877 (+)
LOC110490738 LOC106576023 coding upstream 142833 48433758 ~ 48441874 (+)
kiss2 kiss2 coding upstream 224154 48359799 ~ 48360553 (+)
LOC110490188 LOC106566434 coding upstream 246841 48336131 ~ 48337866 (+)
lamtor4 LOC106576032 coding downstream 164887 48750150 ~ 48752766 (+)
LOC110490204 LOC106576029 coding downstream 171942 48757205 ~ 48767893 (+)
LOC110490205 LOC106576033 coding downstream 190193 48775456 ~ 48783034 (+)
LOC110490215 LOC106576040 coding downstream 267316 48852579 ~ 48859532 (+)
LOC110490216 LOC106609152 coding downstream 369807 48955070 ~ 48957811 (+)
G1301182 NA non-coding upstream 42706 48541735 ~ 48542001 (+)
G1301178 NA non-coding upstream 46530 48537840 ~ 48538177 (+)
G1301173 NA non-coding upstream 53914 48530555 ~ 48530793 (+)
G1301169 NA non-coding upstream 57584 48526878 ~ 48527123 (+)
G1301167 NA non-coding upstream 60490 48524004 ~ 48524217 (+)
G1301256 NA non-coding downstream 9184 48594447 ~ 48594697 (+)
G1301272 NA non-coding downstream 17388 48602651 ~ 48603258 (+)
G1301291 NA non-coding downstream 22882 48608145 ~ 48608345 (+)
G1301313 NA non-coding downstream 54590 48639853 ~ 48646791 (+)
G1301329 NA non-coding downstream 78056 48663319 ~ 48663572 (+)
G1300598 LOC106575986 other upstream 636815 47946368 ~ 47947892 (+)
G1299894 NA other upstream 1014044 47569830 ~ 47570663 (+)
brd1a LOC106575995 other upstream 2268705 46293582 ~ 46316075 (+)
G1298452 NA other upstream 2324270 46254339 ~ 46260437 (+)
G1301458 NA other downstream 344783 48930046 ~ 48930588 (+)
G1301706 NA other downstream 809960 49395223 ~ 49396921 (+)
LOC110490228 NA other downstream 813195 49398275 ~ 49410313 (+)
G1303015 NA other downstream 1593011 50178274 ~ 50178565 (+)
G1303095 LOC106609233 other downstream 1716182 50301445 ~ 50302351 (+)

Expression


Co-expression Network