G1301739


Basic Information

Item Value
gene id G1301739
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48615903 ~ 48616419 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1485162
cacacacacacacagagagatgaagaCAAAGCAGCTGTTTAATCCTAAATCCTTACAATAGGGAGCAGAACAACACTGGTTAATCCACTATGCTCTCCGAAAGTCAACAAAGAACAATTCAATTTTCTTACAGTGTAGCCTATAGATGCAGGAAAGAAAGTGAACTtgaccaaaacaatggaaatgccATGGCAACGCCACTCACACAGTCCCCAAGGGGGGAAAGATTCAGAATCTcctcattgcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccatcaaaattagcctacatttaggCTATGGCATTTCACCCTATTTGGGGGTAAAATCAGAGTGtaatgcttgtatggatgtcaaccccaatacatgttcatgtcatTGTCACCAACCAACTGCATTACACTTAAACACAGCTTCAAGTAGC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1485162 True 468 lncRNA 0.50 2 48615903 48616419

Neighbor

gene id symbol gene type direction distance location
LOC110490198 mov10 coding downstream 34795 48543196 ~ 48581108 (-)
LOC110490197 irf5 coding downstream 97291 48509737 ~ 48518612 (-)
LOC110490195 LOC100135983 coding downstream 127804 48479898 ~ 48488099 (-)
LOC110490193 LOC106576024 coding downstream 151166 48444455 ~ 48464737 (-)
strap LOC106609126 coding downstream 193966 48413786 ~ 48421937 (-)
drd4-rs LOC106609138 coding upstream 48513 48664932 ~ 48693199 (-)
LOC118938891 LOC106576028 coding upstream 126217 48742636 ~ 48744440 (-)
zgc:193726 LOC106576030 coding upstream 128123 48744542 ~ 48747684 (-)
atp6v1f atp6v1f coding upstream 131984 48748403 ~ 48750105 (-)
LOC110490207 LOC106609140 coding upstream 137093 48753512 ~ 48757040 (-)
G1301262 NA non-coding downstream 17524 48598069 ~ 48598379 (-)
G1301206 NA non-coding downstream 26822 48587741 ~ 48589081 (-)
G1301249 NA non-coding downstream 31390 48584267 ~ 48584513 (-)
G1301248 NA non-coding downstream 34051 48581509 ~ 48581852 (-)
G1301236 NA non-coding downstream 75226 48540369 ~ 48540677 (-)
G1301737 NA non-coding upstream 20332 48636751 ~ 48658613 (-)
G1301778 NA non-coding upstream 78570 48694989 ~ 48695281 (-)
G1301785 NA non-coding upstream 86869 48703288 ~ 48703661 (-)
G1301795 NA non-coding upstream 105755 48722174 ~ 48722390 (-)
G1301811 NA non-coding upstream 151540 48767959 ~ 48768228 (-)
celsr1a LOC106576003 other downstream 911865 47584674 ~ 47707520 (-)
tbc1d22a tbc1d22a other downstream 1396288 47217532 ~ 47405004 (-)
tafa5a fam19a5 other downstream 1662479 46822067 ~ 46995100 (-)
G1298541 LOC106575995 other downstream 2317951 46295361 ~ 46297952 (-)
G1298177 NA other downstream 2626640 45956059 ~ 45989263 (-)
si:dkeyp-27e10.3 LOC106576037 other upstream 219175 48822973 ~ 48839311 (-)
G1302602 NA other upstream 1047532 49663951 ~ 49664296 (-)
LOC110490244 LOC106609225 other upstream 1683045 50290050 ~ 50301082 (-)
LOC110490264 LOC106576080 other upstream 2582810 51199223 ~ 51205927 (-)
LOC110490744 LOC106576129 other upstream 3170212 51785488 ~ 51793354 (-)

Expression


Co-expression Network