Gene
RNA
| Item | Value |
|---|---|
| gene id | G1301795 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 48722174 ~ 48722390 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1485218 | True | 217 | lncRNA | 0.54 | 1 | 48722174 | 48722390 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| drd4-rs | LOC106609138 | coding | downstream | 28975 | 48664932 ~ 48693199 (-) |
| LOC110490200 | LOC106576027 | coding | downstream | 86803 | 48609499 ~ 48635371 (-) |
| LOC110490198 | mov10 | coding | downstream | 141066 | 48543196 ~ 48581108 (-) |
| LOC110490197 | irf5 | coding | downstream | 203562 | 48509737 ~ 48518612 (-) |
| LOC110490195 | LOC100135983 | coding | downstream | 234075 | 48479898 ~ 48488099 (-) |
| LOC118938891 | LOC106576028 | coding | upstream | 20246 | 48742636 ~ 48744440 (-) |
| zgc:193726 | LOC106576030 | coding | upstream | 22152 | 48744542 ~ 48747684 (-) |
| atp6v1f | atp6v1f | coding | upstream | 26013 | 48748403 ~ 48750105 (-) |
| LOC110490207 | LOC106609140 | coding | upstream | 31122 | 48753512 ~ 48757040 (-) |
| dennd6b | dennd6b | coding | upstream | 47425 | 48769815 ~ 48775379 (-) |
| G1301785 | NA | non-coding | downstream | 18513 | 48703288 ~ 48703661 (-) |
| G1301778 | NA | non-coding | downstream | 26893 | 48694989 ~ 48695281 (-) |
| G1301737 | NA | non-coding | downstream | 63561 | 48636751 ~ 48658613 (-) |
| G1301739 | NA | non-coding | downstream | 105755 | 48615903 ~ 48616419 (-) |
| G1301262 | NA | non-coding | downstream | 123795 | 48598069 ~ 48598379 (-) |
| G1301811 | NA | non-coding | upstream | 45569 | 48767959 ~ 48768228 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | non-coding | upstream | 100584 | 48822973 ~ 48839311 (-) |
| G1301877 | NA | non-coding | upstream | 184420 | 48906810 ~ 48907165 (-) |
| G1301905 | NA | non-coding | upstream | 225722 | 48948112 ~ 48948826 (-) |
| G1301914 | NA | non-coding | upstream | 236642 | 48959032 ~ 49046066 (-) |
| celsr1a | LOC106576003 | other | downstream | 1018136 | 47584674 ~ 47707520 (-) |
| tbc1d22a | tbc1d22a | other | downstream | 1502559 | 47217532 ~ 47405004 (-) |
| tafa5a | fam19a5 | other | downstream | 1768750 | 46822067 ~ 46995100 (-) |
| G1298541 | LOC106575995 | other | downstream | 2424222 | 46295361 ~ 46297952 (-) |
| G1298177 | NA | other | downstream | 2732911 | 45956059 ~ 45989263 (-) |
| G1302602 | NA | other | upstream | 941561 | 49663951 ~ 49664296 (-) |
| LOC110490244 | LOC106609225 | other | upstream | 1577074 | 50290050 ~ 50301082 (-) |
| LOC110490264 | LOC106576080 | other | upstream | 2476839 | 51199223 ~ 51205927 (-) |
| LOC110490744 | LOC106576129 | other | upstream | 3064241 | 51785488 ~ 51793354 (-) |
