Gene
RNA
| Item | Value |
|---|---|
| gene id | G1301285 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 48767980 ~ 48768236 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1484646 | True | 257 | lncRNA | 0.33 | 1 | 48767980 | 48768236 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490204 | LOC106576029 | coding | upstream | 87 | 48757205 ~ 48767893 (+) |
| lamtor4 | LOC106576032 | coding | upstream | 15214 | 48750150 ~ 48752766 (+) |
| LOC110490196 | tnpo3 | coding | upstream | 258148 | 48492575 ~ 48509832 (+) |
| LOC110490194 | calu | coding | upstream | 288103 | 48470021 ~ 48479877 (+) |
| LOC110490738 | LOC106576023 | coding | upstream | 326106 | 48433758 ~ 48441874 (+) |
| LOC110490205 | LOC106576033 | coding | downstream | 7220 | 48775456 ~ 48783034 (+) |
| LOC110490215 | LOC106576040 | coding | downstream | 84343 | 48852579 ~ 48859532 (+) |
| LOC110490216 | LOC106609152 | coding | downstream | 186834 | 48955070 ~ 48957811 (+) |
| LOC118938892 | NA | coding | downstream | 224941 | 48993177 ~ 48993971 (+) |
| LOC118938811 | NA | coding | downstream | 243085 | 49011321 ~ 49015350 (+) |
| G1301366 | NA | non-coding | upstream | 36419 | 48727392 ~ 48731561 (+) |
| G1301358 | NA | non-coding | upstream | 58596 | 48709140 ~ 48709384 (+) |
| G1301357 | NA | non-coding | upstream | 59505 | 48708197 ~ 48708475 (+) |
| G1301355 | NA | non-coding | upstream | 60924 | 48706722 ~ 48707056 (+) |
| G1301329 | NA | non-coding | upstream | 104408 | 48663319 ~ 48663572 (+) |
| G1301434 | NA | non-coding | downstream | 125302 | 48893538 ~ 48893741 (+) |
| G1301439 | NA | non-coding | downstream | 130452 | 48898688 ~ 48898972 (+) |
| G1301446 | NA | non-coding | downstream | 140282 | 48908518 ~ 48908726 (+) |
| G1301450 | NA | non-coding | downstream | 148760 | 48916996 ~ 48917271 (+) |
| G1301461 | NA | non-coding | downstream | 166957 | 48935193 ~ 48935406 (+) |
| G1301200 | NA | other | upstream | 182717 | 48584707 ~ 48585263 (+) |
| kiss2 | kiss2 | other | upstream | 407541 | 48359799 ~ 48360553 (+) |
| G1300598 | LOC106575986 | other | upstream | 820088 | 47946368 ~ 47947892 (+) |
| G1299894 | NA | other | upstream | 1197317 | 47569830 ~ 47570663 (+) |
| brd1a | LOC106575995 | other | upstream | 2451978 | 46293582 ~ 46316075 (+) |
| G1301458 | NA | other | downstream | 161810 | 48930046 ~ 48930588 (+) |
| G1301706 | NA | other | downstream | 626987 | 49395223 ~ 49396921 (+) |
| LOC110490228 | NA | other | downstream | 630222 | 49398275 ~ 49410313 (+) |
| G1303015 | NA | other | downstream | 1410038 | 50178274 ~ 50178565 (+) |
| G1303095 | LOC106609233 | other | downstream | 1533209 | 50301445 ~ 50302351 (+) |
