G1301439


Basic Information

Item Value
gene id G1301439
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48898688 ~ 48898972 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1484821
ccactttctaaatactgttgacatctgctggaagccttgggaagtgcaatctgcccccatagacacagcatattggataggcaatcacttaaattaaactacaaacctcagatttcccacttcctggttggatttgtctcaggttttcgcctgacatatgagttctgttctactcacagacatccttcaaacagttttagaaacttcagtgttttctatccaatactactaataatatgcatatattagcatctgggacagagtagcaggcagtttactctgggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1484821 True 285 lncRNA 0.41 1 48898688 48898972

Neighbor

gene id symbol gene type direction distance location
LOC110490215 LOC106576040 coding upstream 39156 48852579 ~ 48859532 (+)
LOC110490205 LOC106576033 coding upstream 115654 48775456 ~ 48783034 (+)
LOC110490204 LOC106576029 coding upstream 130795 48757205 ~ 48767893 (+)
lamtor4 LOC106576032 coding upstream 145922 48750150 ~ 48752766 (+)
LOC110490196 tnpo3 coding upstream 388856 48492575 ~ 48509832 (+)
LOC110490216 LOC106609152 coding downstream 56098 48955070 ~ 48957811 (+)
LOC118938892 NA coding downstream 94205 48993177 ~ 48993971 (+)
LOC118938811 NA coding downstream 112349 49011321 ~ 49015350 (+)
LOC118938893 NA coding downstream 137020 49035992 ~ 49036786 (+)
LOC110490217 LOC106576042 coding downstream 152943 49051915 ~ 49058766 (+)
G1301434 NA non-coding upstream 4947 48893538 ~ 48893741 (+)
G1301285 NA non-coding upstream 130452 48767980 ~ 48768236 (+)
G1301366 NA non-coding upstream 167127 48727392 ~ 48731561 (+)
G1301358 NA non-coding upstream 189304 48709140 ~ 48709384 (+)
G1301357 NA non-coding upstream 190213 48708197 ~ 48708475 (+)
G1301446 NA non-coding downstream 9546 48908518 ~ 48908726 (+)
G1301450 NA non-coding downstream 18024 48916996 ~ 48917271 (+)
G1301461 NA non-coding downstream 36221 48935193 ~ 48935406 (+)
G1301462 NA non-coding downstream 37804 48936776 ~ 48937060 (+)
G1301468 NA non-coding downstream 43581 48942553 ~ 48943105 (+)
G1301200 NA other upstream 313425 48584707 ~ 48585263 (+)
kiss2 kiss2 other upstream 538249 48359799 ~ 48360553 (+)
G1300598 LOC106575986 other upstream 950796 47946368 ~ 47947892 (+)
G1299894 NA other upstream 1328025 47569830 ~ 47570663 (+)
brd1a LOC106575995 other upstream 2582686 46293582 ~ 46316075 (+)
G1301458 NA other downstream 31074 48930046 ~ 48930588 (+)
G1301706 NA other downstream 496251 49395223 ~ 49396921 (+)
LOC110490228 NA other downstream 499486 49398275 ~ 49410313 (+)
G1303015 NA other downstream 1279302 50178274 ~ 50178565 (+)
G1303095 LOC106609233 other downstream 1402473 50301445 ~ 50302351 (+)

Expression


Co-expression Network