Gene
RNA
| Item | Value |
|---|---|
| gene id | G1301877 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 48906810 ~ 48907165 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1485313 | True | 356 | lncRNA | 0.39 | 1 | 48906810 | 48907165 |
48,905,600
48,906,000
48,906,400
48,906,800
48,907,200
48,907,600
48,908,000
48,908,000
48,908,400
48,908,800
48,909,200
48,909,600
48,910,000
48,910,400
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490212 | LOC106576039 | coding | downstream | 16271 | 48858509 ~ 48890539 (-) |
| parp12b | LOC106576038 | coding | downstream | 54845 | 48839430 ~ 48851965 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | coding | downstream | 67499 | 48822973 ~ 48839311 (-) |
| svopl | svopl | coding | downstream | 84040 | 48813984 ~ 48822770 (-) |
| LOC110490203 | LOC106609145 | coding | downstream | 93762 | 48784441 ~ 48813048 (-) |
| LOC118938809 | LOC106576042 | coding | upstream | 62839 | 48970004 ~ 48976098 (-) |
| LOC118938810 | LOC106576042 | coding | upstream | 106575 | 49013740 ~ 49018843 (-) |
| LOC110490221 | timp3 | coding | upstream | 270017 | 49177182 ~ 49195672 (-) |
| LOC110490222 | LOC106576046 | coding | upstream | 357540 | 49264705 ~ 49305695 (-) |
| LOC110490224 | LOC106609251 | coding | upstream | 408508 | 49315673 ~ 49371926 (-) |
| G1301811 | NA | non-coding | downstream | 138582 | 48767959 ~ 48768228 (-) |
| G1301795 | NA | non-coding | downstream | 184420 | 48722174 ~ 48722390 (-) |
| G1301785 | NA | non-coding | downstream | 203149 | 48703288 ~ 48703661 (-) |
| G1301778 | NA | non-coding | downstream | 211529 | 48694989 ~ 48695281 (-) |
| G1301905 | NA | non-coding | upstream | 40947 | 48948112 ~ 48948826 (-) |
| G1301914 | NA | non-coding | upstream | 51867 | 48959032 ~ 49046066 (-) |
| G1301947 | NA | non-coding | upstream | 145632 | 49052797 ~ 49053945 (-) |
| G1302146 | NA | non-coding | upstream | 443641 | 49350806 ~ 49351034 (-) |
| G1302151 | NA | non-coding | upstream | 452212 | 49359377 ~ 49359584 (-) |
| celsr1a | LOC106576003 | other | downstream | 1202772 | 47584674 ~ 47707520 (-) |
| tbc1d22a | tbc1d22a | other | downstream | 1687195 | 47217532 ~ 47405004 (-) |
| tafa5a | fam19a5 | other | downstream | 1953386 | 46822067 ~ 46995100 (-) |
| G1298541 | LOC106575995 | other | downstream | 2608858 | 46295361 ~ 46297952 (-) |
| G1302602 | NA | other | upstream | 756786 | 49663951 ~ 49664296 (-) |
| LOC110490244 | LOC106609225 | other | upstream | 1392299 | 50290050 ~ 50301082 (-) |
| LOC110490264 | LOC106576080 | other | upstream | 2292064 | 51199223 ~ 51205927 (-) |
| LOC110490744 | LOC106576129 | other | upstream | 2879466 | 51785488 ~ 51793354 (-) |
| G1304896 | LOC107662719 | other | upstream | 3014330 | 51921495 ~ 51922528 (-) |
