G1301462


Basic Information

Item Value
gene id G1301462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48936776 ~ 48937060 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1484844
gccatgtatcgtgagattgagtgaaaacctccttccatcagcaagggcattgaagatgaaacgtggctgggtctttcagcatgacaatgatcccaaacacacctcccgggcaacgaaggagtggcttcgtaagaagcatttcaaggtcctggagtggcctagccagtctccagatctcaaccccatagaaaatctttggagggagttgaaagtccgtgttgcccagcaacagccccaaaacatcactgctctagaggagatctgcatggaggaatgggtcaaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1484844 True 285 lncRNA 0.50 1 48936776 48937060

Neighbor

gene id symbol gene type direction distance location
LOC110490215 LOC106576040 coding upstream 77244 48852579 ~ 48859532 (+)
LOC110490205 LOC106576033 coding upstream 153742 48775456 ~ 48783034 (+)
LOC110490204 LOC106576029 coding upstream 168883 48757205 ~ 48767893 (+)
lamtor4 LOC106576032 coding upstream 184010 48750150 ~ 48752766 (+)
LOC110490196 tnpo3 coding upstream 426944 48492575 ~ 48509832 (+)
LOC110490216 LOC106609152 coding downstream 18010 48955070 ~ 48957811 (+)
LOC118938892 NA coding downstream 56117 48993177 ~ 48993971 (+)
LOC118938811 NA coding downstream 74261 49011321 ~ 49015350 (+)
LOC118938893 NA coding downstream 98932 49035992 ~ 49036786 (+)
LOC110490217 LOC106576042 coding downstream 114855 49051915 ~ 49058766 (+)
G1301461 NA non-coding upstream 1370 48935193 ~ 48935406 (+)
G1301450 NA non-coding upstream 19505 48916996 ~ 48917271 (+)
G1301446 NA non-coding upstream 28050 48908518 ~ 48908726 (+)
G1301439 NA non-coding upstream 37804 48898688 ~ 48898972 (+)
G1301434 NA non-coding upstream 43035 48893538 ~ 48893741 (+)
G1301468 NA non-coding downstream 5493 48942553 ~ 48943105 (+)
G1301472 NA non-coding downstream 9293 48946353 ~ 48946552 (+)
G1301480 NA non-coding downstream 21822 48958882 ~ 49046095 (+)
G1301489 NA non-coding downstream 38563 48975623 ~ 48981348 (+)
G1301490 NA non-coding downstream 45889 48982949 ~ 48987048 (+)
G1301458 NA other upstream 6188 48930046 ~ 48930588 (+)
G1301200 NA other upstream 351513 48584707 ~ 48585263 (+)
kiss2 kiss2 other upstream 576337 48359799 ~ 48360553 (+)
G1300598 LOC106575986 other upstream 988884 47946368 ~ 47947892 (+)
G1299894 NA other upstream 1366113 47569830 ~ 47570663 (+)
G1301706 NA other downstream 458163 49395223 ~ 49396921 (+)
LOC110490228 NA other downstream 461398 49398275 ~ 49410313 (+)
G1303015 NA other downstream 1241214 50178274 ~ 50178565 (+)
G1303095 LOC106609233 other downstream 1364385 50301445 ~ 50302351 (+)
LOC110490250 LOC106609227 other downstream 1422150 50358439 ~ 50372219 (+)

Expression


Co-expression Network