Gene
RNA
| Item | Value |
|---|---|
| gene id | G1301468 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 48942553 ~ 48943105 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1484851 | True | 553 | lncRNA | 0.41 | 1 | 48942553 | 48943105 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490215 | LOC106576040 | coding | upstream | 83021 | 48852579 ~ 48859532 (+) |
| LOC110490205 | LOC106576033 | coding | upstream | 159519 | 48775456 ~ 48783034 (+) |
| LOC110490204 | LOC106576029 | coding | upstream | 174660 | 48757205 ~ 48767893 (+) |
| lamtor4 | LOC106576032 | coding | upstream | 189787 | 48750150 ~ 48752766 (+) |
| LOC110490196 | tnpo3 | coding | upstream | 432721 | 48492575 ~ 48509832 (+) |
| LOC110490216 | LOC106609152 | coding | downstream | 11965 | 48955070 ~ 48957811 (+) |
| LOC118938892 | NA | coding | downstream | 50072 | 48993177 ~ 48993971 (+) |
| LOC118938811 | NA | coding | downstream | 68216 | 49011321 ~ 49015350 (+) |
| LOC118938893 | NA | coding | downstream | 92887 | 49035992 ~ 49036786 (+) |
| LOC110490217 | LOC106576042 | coding | downstream | 108810 | 49051915 ~ 49058766 (+) |
| G1301462 | NA | non-coding | upstream | 5493 | 48936776 ~ 48937060 (+) |
| G1301461 | NA | non-coding | upstream | 7147 | 48935193 ~ 48935406 (+) |
| G1301450 | NA | non-coding | upstream | 25282 | 48916996 ~ 48917271 (+) |
| G1301446 | NA | non-coding | upstream | 33827 | 48908518 ~ 48908726 (+) |
| G1301439 | NA | non-coding | upstream | 43581 | 48898688 ~ 48898972 (+) |
| G1301472 | NA | non-coding | downstream | 3248 | 48946353 ~ 48946552 (+) |
| G1301480 | NA | non-coding | downstream | 15777 | 48958882 ~ 49046095 (+) |
| G1301489 | NA | non-coding | downstream | 32518 | 48975623 ~ 48981348 (+) |
| G1301490 | NA | non-coding | downstream | 39844 | 48982949 ~ 48987048 (+) |
| LOC110490219 | LOC100286412 | non-coding | downstream | 122606 | 49065642 ~ 49106682 (+) |
| G1301458 | NA | other | upstream | 11965 | 48930046 ~ 48930588 (+) |
| G1301200 | NA | other | upstream | 357290 | 48584707 ~ 48585263 (+) |
| kiss2 | kiss2 | other | upstream | 582114 | 48359799 ~ 48360553 (+) |
| G1300598 | LOC106575986 | other | upstream | 994661 | 47946368 ~ 47947892 (+) |
| G1299894 | NA | other | upstream | 1371890 | 47569830 ~ 47570663 (+) |
| G1301706 | NA | other | downstream | 452118 | 49395223 ~ 49396921 (+) |
| LOC110490228 | NA | other | downstream | 455353 | 49398275 ~ 49410313 (+) |
| G1303015 | NA | other | downstream | 1235169 | 50178274 ~ 50178565 (+) |
| G1303095 | LOC106609233 | other | downstream | 1358340 | 50301445 ~ 50302351 (+) |
| LOC110490250 | LOC106609227 | other | downstream | 1416105 | 50358439 ~ 50372219 (+) |
