G1301472


Basic Information

Item Value
gene id G1301472
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48946353 ~ 48946552 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1484855
gaaaaggtggaaagttttaagttcctctgtgtacacatcaAGGATAAACTAAAATGgttcactcacacagacagtgtggtgaagaaggcgcaacagcgcctcttcaacctcaggagactgaagaaatttggcttgtcacctaaaaccctcacaaacatttacagatgcacaattgagagcatcctgtcgggctgtatcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1484855 True 200 lncRNA 0.44 1 48946353 48946552

Neighbor

gene id symbol gene type direction distance location
LOC110490215 LOC106576040 coding upstream 86821 48852579 ~ 48859532 (+)
LOC110490205 LOC106576033 coding upstream 163319 48775456 ~ 48783034 (+)
LOC110490204 LOC106576029 coding upstream 178460 48757205 ~ 48767893 (+)
lamtor4 LOC106576032 coding upstream 193587 48750150 ~ 48752766 (+)
LOC110490196 tnpo3 coding upstream 436521 48492575 ~ 48509832 (+)
LOC110490216 LOC106609152 coding downstream 8518 48955070 ~ 48957811 (+)
LOC118938892 NA coding downstream 46625 48993177 ~ 48993971 (+)
LOC118938811 NA coding downstream 64769 49011321 ~ 49015350 (+)
LOC118938893 NA coding downstream 89440 49035992 ~ 49036786 (+)
LOC110490217 LOC106576042 coding downstream 105363 49051915 ~ 49058766 (+)
G1301468 NA non-coding upstream 3248 48942553 ~ 48943105 (+)
G1301462 NA non-coding upstream 9293 48936776 ~ 48937060 (+)
G1301461 NA non-coding upstream 10947 48935193 ~ 48935406 (+)
G1301450 NA non-coding upstream 29082 48916996 ~ 48917271 (+)
G1301446 NA non-coding upstream 37627 48908518 ~ 48908726 (+)
G1301480 NA non-coding downstream 12330 48958882 ~ 49046095 (+)
G1301489 NA non-coding downstream 29071 48975623 ~ 48981348 (+)
G1301490 NA non-coding downstream 36397 48982949 ~ 48987048 (+)
LOC110490219 LOC100286412 non-coding downstream 119159 49065642 ~ 49106682 (+)
G1301684 NA non-coding downstream 399541 49346093 ~ 49346309 (+)
G1301458 NA other upstream 15765 48930046 ~ 48930588 (+)
G1301200 NA other upstream 361090 48584707 ~ 48585263 (+)
kiss2 kiss2 other upstream 585914 48359799 ~ 48360553 (+)
G1300598 LOC106575986 other upstream 998461 47946368 ~ 47947892 (+)
G1299894 NA other upstream 1375690 47569830 ~ 47570663 (+)
G1301706 NA other downstream 448671 49395223 ~ 49396921 (+)
LOC110490228 NA other downstream 451906 49398275 ~ 49410313 (+)
G1303015 NA other downstream 1231722 50178274 ~ 50178565 (+)
G1303095 LOC106609233 other downstream 1354893 50301445 ~ 50302351 (+)
LOC110490250 LOC106609227 other downstream 1412658 50358439 ~ 50372219 (+)

Expression


Co-expression Network