G1301905


Basic Information

Item Value
gene id G1301905
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48948112 ~ 48948826 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1485341
GGTCTGTAGAAGAACAGGTTGTTCTTTGAGATGTTCTGCTGGGGAgtaaaatcaaatacaattttattggtcacatacacatggttagtagatgttattgcgagtgtagtgaaatacttgtgcttctagttccgacagtgcagtaatatctaacaagtaatctaacaattccacaacaactacctaatacactcaAATTTAAGTAAAGGGAggtaataagaatatatacagtggggagaacaagtatttgatacactgctgattttgcaggttttcctacttacaaagcatgtagaggtctgtaatttttatcataggtacacttcaactgtgagagacggaatctaaaacaaaaatccagaaaatcacattgtacgatttttaagtaattcatttgcattttattgcatgacataagtatttgatcacctaccaaccagtaagaattccagctctcacagacctgttagtttttctttaacaagccctcctgttctccgctcattacctgtattaactgcacctgtttgaactcgttacctgcataaaagacacctgtccacacactcaatcaaacagactccaacctctccacaatggccaagaccagagagctgtgtaaggacatcaggggtaaaggctgggatgggctacaggacaataggcaagcagcttggtgagaaggcaacaactgttggcgcaattattagaaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1485341 True 715 lncRNA 0.39 1 48948112 48948826

Neighbor

gene id symbol gene type direction distance location
LOC110490212 LOC106576039 coding downstream 57573 48858509 ~ 48890539 (-)
parp12b LOC106576038 coding downstream 96147 48839430 ~ 48851965 (-)
si:dkeyp-27e10.3 LOC106576037 coding downstream 108801 48822973 ~ 48839311 (-)
svopl svopl coding downstream 125342 48813984 ~ 48822770 (-)
LOC110490203 LOC106609145 coding downstream 135064 48784441 ~ 48813048 (-)
LOC118938809 LOC106576042 coding upstream 21178 48970004 ~ 48976098 (-)
LOC118938810 LOC106576042 coding upstream 64914 49013740 ~ 49018843 (-)
LOC110490221 timp3 coding upstream 228356 49177182 ~ 49195672 (-)
LOC110490222 LOC106576046 coding upstream 315879 49264705 ~ 49305695 (-)
LOC110490224 LOC106609251 coding upstream 366847 49315673 ~ 49371926 (-)
G1301877 NA non-coding downstream 40947 48906810 ~ 48907165 (-)
G1301811 NA non-coding downstream 179884 48767959 ~ 48768228 (-)
G1301795 NA non-coding downstream 225722 48722174 ~ 48722390 (-)
G1301785 NA non-coding downstream 244451 48703288 ~ 48703661 (-)
G1301914 NA non-coding upstream 10206 48959032 ~ 49046066 (-)
G1301947 NA non-coding upstream 103971 49052797 ~ 49053945 (-)
G1302146 NA non-coding upstream 401980 49350806 ~ 49351034 (-)
G1302151 NA non-coding upstream 410551 49359377 ~ 49359584 (-)
G1302159 NA non-coding upstream 427145 49375971 ~ 49377619 (-)
celsr1a LOC106576003 other downstream 1244074 47584674 ~ 47707520 (-)
tbc1d22a tbc1d22a other downstream 1728497 47217532 ~ 47405004 (-)
tafa5a fam19a5 other downstream 1994688 46822067 ~ 46995100 (-)
G1298541 LOC106575995 other downstream 2650160 46295361 ~ 46297952 (-)
G1302602 NA other upstream 715125 49663951 ~ 49664296 (-)
LOC110490244 LOC106609225 other upstream 1350638 50290050 ~ 50301082 (-)
LOC110490264 LOC106576080 other upstream 2250403 51199223 ~ 51205927 (-)
LOC110490744 LOC106576129 other upstream 2837805 51785488 ~ 51793354 (-)
G1304896 LOC107662719 other upstream 2972669 51921495 ~ 51922528 (-)

Expression


Co-expression Network