G1301490


Basic Information

Item Value
gene id G1301490
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48982949 ~ 48987048 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1484881
ttgctgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgccttattattatttgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatcttcacccggcacagccagaagaggactggccaccccacatagcctggttcctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagggctatgtaaagaaatttgatttgatttgattttgatttaactaaacagaatactactgttactgtaggaATGTTggaatcttattataatcataatactgaataaggtgtgtagttttagtcaagaattagaacatTGActttttaacattttaataaaaatagatgtgttttTTAACATTCTTATAAAAATAGAGGTGTGATTGGATGTATAATATTTAGTCATACGGTGGATATGTTATGATATTTTTATGACTAATGACTAAATGTATACATTCAGTTTAGAATTATAACTTAACAGaatattactctgttactgtaggaatgtatgaatcttattataatcataatactgaatataaggtgtgtagttttagtcaagaattagaacaatgactttCTGTTCCTTGGTATAAACAaatggagctatcgtcagaccaggcggaatactgtgttccttacaggacattctgtccctacccagggaggggagagaccttggcCTTGTAGTATattgtttaacaggtggcatacaatgtgagaaggcttgtgaactatattgctattgtatctgagaggaggagagacatttatgacaaaatgtgaggtatataaaccaatgtacatggtATTATGACCAGAGCTCTCAGGAAATAAACGCTACTGATTAATTTTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1484881 True 989 lncRNA 0.37 2 48982949 48987048

Neighbor

gene id symbol gene type direction distance location
LOC110490216 LOC106609152 coding upstream 25138 48955070 ~ 48957811 (+)
LOC110490215 LOC106576040 coding upstream 123417 48852579 ~ 48859532 (+)
LOC110490205 LOC106576033 coding upstream 199915 48775456 ~ 48783034 (+)
LOC110490204 LOC106576029 coding upstream 215056 48757205 ~ 48767893 (+)
lamtor4 LOC106576032 coding upstream 230183 48750150 ~ 48752766 (+)
LOC118938892 NA coding downstream 6129 48993177 ~ 48993971 (+)
LOC118938811 NA coding downstream 24273 49011321 ~ 49015350 (+)
LOC118938893 NA coding downstream 48944 49035992 ~ 49036786 (+)
LOC110490217 LOC106576042 coding downstream 64867 49051915 ~ 49058766 (+)
LOC110490219 LOC100286412 coding downstream 78594 49065642 ~ 49106682 (+)
G1301489 NA non-coding upstream 1601 48975623 ~ 48981348 (+)
G1301472 NA non-coding upstream 36397 48946353 ~ 48946552 (+)
G1301468 NA non-coding upstream 39844 48942553 ~ 48943105 (+)
G1301462 NA non-coding upstream 45889 48936776 ~ 48937060 (+)
G1301461 NA non-coding upstream 47543 48935193 ~ 48935406 (+)
G1301684 NA non-coding downstream 359045 49346093 ~ 49346309 (+)
G1301706 NA non-coding downstream 409378 49395223 ~ 49396921 (+)
G1301708 NA non-coding downstream 410710 49397758 ~ 49398022 (+)
G1301727 NA non-coding downstream 443758 49430806 ~ 49431122 (+)
G1301458 NA other upstream 52361 48930046 ~ 48930588 (+)
G1301200 NA other upstream 397686 48584707 ~ 48585263 (+)
kiss2 kiss2 other upstream 622510 48359799 ~ 48360553 (+)
G1300598 LOC106575986 other upstream 1035057 47946368 ~ 47947892 (+)
G1299894 NA other upstream 1412286 47569830 ~ 47570663 (+)
LOC110490228 NA other downstream 411410 49398275 ~ 49410313 (+)
G1303015 NA other downstream 1191226 50178274 ~ 50178565 (+)
G1303095 LOC106609233 other downstream 1314397 50301445 ~ 50302351 (+)
LOC110490250 LOC106609227 other downstream 1372162 50358439 ~ 50372219 (+)

Expression


Co-expression Network