G1301684


Basic Information

Item Value
gene id G1301684
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 49346093 ~ 49346309 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1485085
CCCAAAAACCAACCACCCCATCCCACTACTTTGGCAGGATGGATAGAACCCCTTCTCTCAAAACTTCCTGTAGATCTTCTGCACTAAAATCTCTCACACCCAAATATTGCtctactactgcaactactacaTCTATATTTCGGTGGTGTCTGCTACATCAGTGCAGTGCAGTTGATCACCACGGCTATAACCGCAAGAAATCCAACCTTACTAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1485085 True 217 lncRNA 0.44 1 49346093 49346309

Neighbor

gene id symbol gene type direction distance location
LOC110490220 LOC106576044 coding upstream 105043 49110297 ~ 49241050 (+)
LOC110490219 LOC100286412 coding upstream 239411 49065642 ~ 49106682 (+)
LOC110490217 LOC106576042 coding upstream 287327 49051915 ~ 49058766 (+)
LOC118938893 NA coding upstream 309307 49035992 ~ 49036786 (+)
LOC118938811 NA coding upstream 330743 49011321 ~ 49015350 (+)
LOC110490226 ifrd1 coding downstream 36924 49383233 ~ 49394324 (+)
LOC110490228 NA coding downstream 51966 49398275 ~ 49410313 (+)
foxp2 LOC106609245 coding downstream 334222 49680531 ~ 49794962 (+)
LOC110490234 LOC106576051 coding downstream 492214 49838523 ~ 49863700 (+)
LOC118938923 NA coding downstream 673308 50019617 ~ 50023828 (+)
G1301480 NA non-coding upstream 299998 48958882 ~ 49046095 (+)
G1301490 NA non-coding upstream 359045 48982949 ~ 48987048 (+)
G1301489 NA non-coding upstream 364745 48975623 ~ 48981348 (+)
G1301472 NA non-coding upstream 399541 48946353 ~ 48946552 (+)
G1301706 NA non-coding downstream 50117 49395223 ~ 49396921 (+)
G1301708 NA non-coding downstream 51449 49397758 ~ 49398022 (+)
G1301727 NA non-coding downstream 84497 49430806 ~ 49431122 (+)
G1301728 NA non-coding downstream 86540 49432849 ~ 49433060 (+)
G1302201 NA non-coding downstream 99836 49446145 ~ 49488630 (+)
G1301458 NA other upstream 415505 48930046 ~ 48930588 (+)
G1301200 NA other upstream 760830 48584707 ~ 48585263 (+)
kiss2 kiss2 other upstream 985654 48359799 ~ 48360553 (+)
G1300598 LOC106575986 other upstream 1398201 47946368 ~ 47947892 (+)
G1299894 NA other upstream 1775430 47569830 ~ 47570663 (+)
G1303015 NA other downstream 831965 50178274 ~ 50178565 (+)
G1303095 LOC106609233 other downstream 955136 50301445 ~ 50302351 (+)
LOC110490250 LOC106609227 other downstream 1012901 50358439 ~ 50372219 (+)

Expression


Co-expression Network