G1301708


Basic Information

Item Value
gene id G1301708
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 49397758 ~ 49398022 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1485118
ggcttgtgtgtggctgctcggcaatggaaacccatttcatgaagctcccgacgaacagttctggtgctgacgttgcttccagagacggtttggaacttggtagtgagtgatTTTTAAGCGGTACACGCTTCAGTACatggcagtcccgttctgtgagcttgtgtggcctaccacgtcgaggctgagccgttgttgctcctagacttttacacttcacaataacagcacttactgttgaccggggcagctctagcaaggcagacat

Function

NR:

description
PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1485118 True 265 lncRNA 0.52 1 49397758 49398022

Neighbor

gene id symbol gene type direction distance location
LOC110490226 ifrd1 coding upstream 3434 49383233 ~ 49394324 (+)
LOC110490220 LOC106576044 coding upstream 156708 49110297 ~ 49241050 (+)
LOC110490219 LOC100286412 coding upstream 291076 49065642 ~ 49106682 (+)
LOC110490217 LOC106576042 coding upstream 338992 49051915 ~ 49058766 (+)
LOC118938893 NA coding upstream 360972 49035992 ~ 49036786 (+)
LOC110490228 NA coding downstream 253 49398275 ~ 49410313 (+)
foxp2 LOC106609245 coding downstream 282509 49680531 ~ 49794962 (+)
LOC110490234 LOC106576051 coding downstream 440501 49838523 ~ 49863700 (+)
LOC118938923 NA coding downstream 621595 50019617 ~ 50023828 (+)
LOC110490236 LOC106609240 coding downstream 763922 50161944 ~ 50170265 (+)
G1301706 NA non-coding upstream 837 49395223 ~ 49396921 (+)
G1301684 NA non-coding upstream 51449 49346093 ~ 49346309 (+)
G1301480 NA non-coding upstream 351663 48958882 ~ 49046095 (+)
G1301727 NA non-coding downstream 32784 49430806 ~ 49431122 (+)
G1301728 NA non-coding downstream 34827 49432849 ~ 49433060 (+)
G1302201 NA non-coding downstream 48123 49446145 ~ 49488630 (+)
G1302242 NA non-coding downstream 111508 49509530 ~ 49510799 (+)
G1302318 NA non-coding downstream 148696 49546718 ~ 49546993 (+)
G1301458 NA other upstream 467170 48930046 ~ 48930588 (+)
G1301200 NA other upstream 812495 48584707 ~ 48585263 (+)
kiss2 kiss2 other upstream 1037319 48359799 ~ 48360553 (+)
G1300598 LOC106575986 other upstream 1449866 47946368 ~ 47947892 (+)
G1303015 NA other downstream 780252 50178274 ~ 50178565 (+)
G1303095 LOC106609233 other downstream 903423 50301445 ~ 50302351 (+)
LOC110490250 LOC106609227 other downstream 961188 50358439 ~ 50372219 (+)
G1303641 NA other downstream 1349340 50747362 ~ 50747715 (+)

Expression


Co-expression Network